WormBase Tree Display for Variation: WBVar02153601

WBVar02153601 Name: Public_name: gk5062
    Other_name: T23G11.6a.1:c.744_1830+174del
      T23G11.5b.1:c.152+603_152+2641del
      T23G11.5a.1:c.776+603_776+2641del
      T23G11.6b.1:c.744_1843+161del
    HGVSg: CHROMOSOME_I:g.7685765_7687803del
  Sequence_details: SMap: S_parent: Sequence: T23G11
    Flanking_sequences: TGCTGTCGTATTTTTGTTACAGTACCTACG GGTGGTTGGAAGATTCCATCAGCACGTGAT
    Mapping_target: CHROMOSOME_I
    Type_of_mutation: Deletion
    SeqStatus: Pending_curation
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037917
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00011971
      WBGene00011970
    Transcript: T23G11.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T23G11.5a.1:c.776+603_776+2641del
        Intron_number: 6/10
      T23G11.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T23G11.6a.1:c.744_1830+174del
        cDNA_position: 801-?
        CDS_position: 744-?
        Protein_position: 248-?
        Intron_number: 7-12/13
        Exon_number: 7-12/14
      T23G11.6c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/4
        Exon_number: 1-3/5
      T23G11.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T23G11.6b.1:c.744_1843+161del
        cDNA_position: 744-?
        CDS_position: 744-?
        Protein_position: 248-?
        Intron_number: 6-11/12
        Exon_number: 6-11/13
      T23G11.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T23G11.5b.1:c.152+603_152+2641del
        Intron_number: 2/5
  Isolation: Mutagen: CRISPR_Cas9
  Genetics: Interpolated_map_position: I 2.23852
  Remark: Batch created from Strain genotype data Curator_confirmed: WBPerson1983
    Deletion_verification Flanking sequences and deletion extents inferred from design of CRISPR deletion/selection cassette insertion HDR event. QC-PCR assays indicate that the event is perfect, but it was not sequenced.
  Method: Deletion_allele