WormBase Tree Display for Variation: WBVar02137577

WBVar02137577 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12220
    Other_name: Y40H4A.1a.3:c.-20+1301C>T
      Y40H4A.1a.1:c.-20+1301C>T
    HGVSg: CHROMOSOME_V:g.14577712G>A
  Sequence_details: SMap: S_parent: Sequence: Y40H4A
    Flanking_sequences: CTTGCTCCGTTCACTTTCGAACCAAACAGGTGAAGTGTAA AAGTTTGAATTCACTGATTGGTTCTAAAGTGGATGTGGCT
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 14577691 14577691
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023761
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00001519
    Transcript: Y40H4A.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y40H4A.1a.1:c.-20+1301C>T
        Intron_number: 2/12
      Y40H4A.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y40H4A.1a.3:c.-20+1301C>T
        Intron_number: 1/11
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose