WormBase Tree Display for Sequence: Y40H4A
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Y40H4A | DNA | Y40H4A | 26272 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00012741 | 18351 | 16202 | |
WBGene00196144 | 6258 | 6137 | ||||
CDS_child (45) | ||||||
Transcript | Y40H4A.3 | 6258 | 6137 | |||
Y40H4A.2.1 | 18351 | 16202 | ||||
PCR_product (11) | ||||||
Allele (776) | ||||||
Oligo_set | Aff_Y40H4A.A | 1720 | 746 | |||
Aff_Y40H4A.B | 17259 | 16240 | ||||
Aff_Y40H4A.C | 25540 | 23338 | ||||
Feature_object (83) | ||||||
Feature_data | Y40H4A:Polysome | 1 | 26272 | |||
Y40H4A:TranscriptionallyActiveRegion | 1 | 26272 | ||||
Y40H4A:ChIPSeqTF | 1 | 26272 | ||||
Y40H4A:TRF | 1 | 26272 | ||||
Y40H4A:Dust | 1 | 26272 | ||||
Y40H4A:inverted | 1 | 26272 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_V | |||
Overlap_right | R11H6 | 26167 | ||||
Overlap_left | C53A5 | |||||
Clone_left_end | R11H6 | 26167 | ||||
Y40H4A | 1 | |||||
Clone_right_end | C53A5 | 104 | ||||
Y40H4A | 26272 | |||||
DB_info | Database | EMBL | NDB_AC | AL034391 | ||
NDB_SV | AL034391.1 | |||||
Secondary_accession | AL022573 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | McMurray AA | ||||
From_laboratory | HX | |||||
Date_directory | 981123 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | Y40H4A | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | aa2f0bfe0327bb472137789dca20ee74 | ||||
Status | Finished | 23 Nov 1998 00:00:00 | ||||
Submitted | 17 Dec 1998 00:00:00 | |||||
Annotated | 03 Dec 1998 00:00:00 | |||||
Map | Sequence-V | Ends | Left | 8268 | ||
Right | 8291 | |||||
Interpolated_map_position | V | 6.50954 | ||||
Assembly_tags | Finished Left | 1 | 4 | Y40H4A | ||
Clone right end | 101 | 104 | C53A5 | |||
Finished Right | 26269 | 26272 | Y40H4A | |||
Clone left end | 26167 | 26172 | R11H6 | |||
annotation | 18899 | 21476 | tandem repeat, size undetermined. Typical repeat element is CCCTTACTTTTGAATTTTTGAAAATAGCAGCTTTTGGTTAAATTCTGAATTTTTAAAAATTAACTT (65-mer) | |||
21377 | 26272 | tandem repeat, size undetermined. Typical repeat element is CCCATACTTTTGAATTTTTGAAAATAATAGCTTCTGGTTAATTTCTGAATTTTTAAAAATTAACTT (65-mer) | ||||
Method | Genomic_canonical |