WormBase Tree Display for Variation: WBVar02133109

WBVar02133109 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h3780
    Other_name: K08E3.7c.1:c.759-22C>T
      K08E3.7a.1:c.945-22C>T
      K08E3.7b.1:c.*122-22C>T
      K08E3.7b.2:c.*122-22C>T
    HGVSg: CHROMOSOME_III:g.13772966C>T
  Sequence_details: SMap: S_parent: Sequence: K08E3
    Flanking_sequences: GTTTTGCAGGTATTTTGAGCTTCTAAATCGGAAATTTTAT GCAATAAATATCATCGTTCAGAAAGTGCTTCGAAAGAAAT
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 13772847 13772847
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023877
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00003967
    Transcript: K08E3.7b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7b.2:c.*122-22C>T
        Intron_number: 6/6
      K08E3.7a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7a.1:c.945-22C>T
        Intron_number: 6/8
      K08E3.7c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7c.1:c.759-22C>T
        Intron_number: 4/5
      K08E3.7b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7b.1:c.*122-22C>T
        Intron_number: 6/7
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose