WormBase Tree Display for Variation: WBVar01429656

WBVar01429656 Evidence: Paper_evidence: WBPaper00041213
  Name: Public_name: n4547
    Other_name: Y43H11AL.3a.2:c.-12-3342_-12-2333del
    HGVSg: CHROMOSOME_II:g.257527_258536del
  Sequence_details: SMap: S_parent: Sequence: B0432
    Flanking_sequences: tttaaaaactatgtgaagtcacacctgtct atcattttgaaaatccgacctttttgcgaa
    Mapping_target: B0432
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00027527
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00004166
      WBGene00000296
    Transcript: Y43H11AL.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y43H11AL.3a.2:c.-12-3342_-12-2333del
        Intron_number: 1/28
      B0432.5c.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/8
        Exon_number: 1-2/9
      B0432.5a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/8
        Exon_number: 1/9
      B0432.5b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-640
        Exon_number: 1/9
  Genetics: Interpolated_map_position: II -15.6718
  Description: Phenotype: WBPhenotype:0000641 Paper_evidence: WBPaper00041213
        Curator_confirmed: WBPerson461
        Remark: Figure 3. The locomotion rates of cat-2 mutants were more variable than those of wild-type animals; Figure 4. cat-2 mutants achieve greater peak acceleration, resulting in large fluctuations in the speed within tracks. Paper_evidence: WBPaper00041213
            Curator_confirmed: WBPerson461
  Disease_info: Models_disease: DOID:14330
    Models_disease_in_annotation: WBDOannot00000970
  Reference: WBPaper00041213
    WBPaper00065310
    WBPaper00065715
  Method: Deletion_allele