WormBase Tree Display for Variation: WBVar00277152

WBVar00277152 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk2435
    Other_name: T01D3.3a.1:c.220+1105A>G
      T01D3.2.1:c.429+74T>C
      T01D3.3c.1:c.223+1105A>G
      T01D3.3b.1:c.380-783A>G
    HGVSg: CHROMOSOME_V:g.13706759A>G
  Sequence_details: SMap: S_parent: Sequence: T01D3
    Flanking_sequences: CTGTAAGCTTAAACTTCTTTCCATACTTGATTTCAGGATGTTTTTGTGAA GTTCAAAACTTGTAACTATAATAAAATATTTTTCCTGAATTTAATTATGT
    Mapping_target: T01D3
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037339
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live: Curator_confirmed: WBPerson4025
  Affects: Gene: WBGene00011328
      WBGene00011327
    Transcript: T01D3.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D3.3c.1:c.223+1105A>G
        Intron_number: 3/9
      T01D3.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D3.3b.1:c.380-783A>G
        Intron_number: 4/13
      T01D3.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D3.2.1:c.429+74T>C
        Intron_number: 4/5
      T01D3.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T01D3.3a.1:c.220+1105A>G
        Intron_number: 2/8
  Isolation: Mutagen: ENU
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    This was suppressed because it overlapped with a corrected genome sequence error feature Feature_evidence: WBsf267807
    This was un-suppressed after examination showed it is not changed by the corrected genome sequence error Curator_confirmed: WBPerson4025
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele