WormBase Tree Display for Variation: WBVar00270971

WBVar00270971 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00270971
    Other_name: uCE4-1373
      CE28871:p.Ser50ValfsTer5
      Y57G11C.4.1:c.144del
    HGVSg: CHROMOSOME_IV:g.14766513del
  Sequence_details: SMap: S_parent: Sequence: Y57G11C
    Flanking_sequences: ACAATTTTAATCAAAGCAAAAAAACTAACGTATTCGACTCCAACTCCCTAACAACCAGCTCCATCTGATCCAGCAAATCATTCACTTCTTCCAAACTTTT CGAATTTCCTGAACTGCTCCGGCTCGATCGGACGATGGCAGAGTGTGCACGCGGCCGATTTTCGAGGTGATTTCCGCAGTTTGAAGCGAATATTGCTTTT
    Mapping_target: Y57G11C
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00013302
    Transcript: Y57G11C.4.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: Y57G11C.4.1:c.144del
        HGVSp: CE28871:p.Ser50ValfsTer5
        cDNA_position: 153
        CDS_position: 144
        Protein_position: 48
        Exon_number: 2/5
        Codon_change: cgA/cg
        Amino_acid_change: R/X
  Reference: WBPaper00005369
  Method: SNP_Swan