WormBase Tree Display for Variation: WBVar00249248
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| WBVar00249248 | Evidence | Paper_evidence | WBPaper00005198 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | te22 | |||||
| Other_name | CE03005:p.Gly172= | ||||||
| C09G9.6.1:c.516G>A | |||||||
| HGVSg | CHROMOSOME_IV:g.8889737G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | C27B7 | |||
| Flanking_sequences | atatacgactacaggactctgcccatacgg | aaacggtgccttttcattcatcccgatcat | |||||
| Mapping_target | C27B7 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005198 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | TX | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003864 | |||||
| Transcript | C09G9.6.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | ||||||
| HGVSc | C09G9.6.1:c.516G>A | ||||||
| HGVSp | CE03005:p.Gly172= | ||||||
| cDNA_position | 626 | ||||||
| CDS_position | 516 | ||||||
| Protein_position | 172 | ||||||
| Exon_number | 5/8 | ||||||
| Codon_change | ggG/ggA | ||||||
| Amino_acid_change | G | ||||||
| Genetics | Interpolated_map_position | IV | 3.99905 | ||||
| Reference | WBPaper00005198 | ||||||
| Remark | G to A change causes Gly to Ala change in the coding region. [021016 ck1] | ||||||
| Method | Substitution_allele |
