WormBase Tree Display for Variation: WBVar00245539

WBVar00245539 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245539
    Other_name: snp_K08E3[1]
      K08E3.7a.1:c.984C>G
      CE49203:p.Asp266Glu
      K08E3.7c.1:c.798C>G
      K08E3.7b.2:c.*161C>G
      CE31713:p.Asp328Glu
      K08E3.7b.1:c.*161C>G
    HGVSg: CHROMOSOME_III:g.13773027C>G
  Sequence_details: SMap: S_parent: Sequence: K08E3
    Flanking_sequences: gaaattgtgtgtgccagagcgaaga gatctcacccgaactacaattgacg
    Mapping_target: K08E3
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00003967
    Transcript: K08E3.7b.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7b.2:c.*161C>G
        cDNA_position: 911
        Exon_number: 7/7
      K08E3.7a.1 (12)
      K08E3.7c.1 (12)
      K08E3.7b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K08E3.7b.1:c.*161C>G
        cDNA_position: 911
        Exon_number: 7/8
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8657 VarS=CG
    Enzymes. Bristol-specific: [Bbr7I,BbsI,Bbv16II,Bco102II,BpiI,BpuAI,BsaVI,Bsc91I,BscKI,BspBS31I,BspIS4I,BspTS514I,BspVI,BstBS32I,BstTS5I,Rtr20I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_K08E3.1
    [20040130 db] this Allele was previously named snp_K08E3.1
    [20090224 db] original Wicks name : K08E3:32218..33182@93 Psnp=0.8657 VarS=CG
    [20090224 db] original Wicks id : eam63c05.s1@15,g,38
    [20090224 db] Snip-SNP
  Method: SNP_Wicks