WormBase Tree Display for Variation: WBVar00239316

WBVar00239316 Evidence: Paper_evidence: WBPaper00031936
  Name: Public_name: pk480
    Other_name: pk480df
      F48C11.1.1:c.623+350_1001del
    HGVSg: CHROMOSOME_X:g.13192589_13193474del
  Sequence_details: SMap: S_parent: Sequence: F48C11
    Flanking_sequences: gccacagtaaaatctttttattttaacatt agcgacagatacggggaatattgatctggt
    Mapping_target: F48C11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00007863
      WBStrain00028950
    Laboratory: NL
    Status: Live
  Affects: Gene: WBGene00001668
    Transcript: F48C11.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F48C11.1.1:c.623+350_1001del
        cDNA_position: ?-1035
        CDS_position: ?-1001
        Protein_position: ?-334
        Intron_number: 6-8/10
        Exon_number: 7-9/11
    Interactor: WBInteraction000502422
      WBInteraction000502424
  Isolation: Mutagen: EMS
  Genetics: Interpolated_map_position: X 10.2257
    Mapping_data: In_multi_point: 4372
  Description: Phenotype (14)
    Phenotype_not_observed: WBPhenotype:0001414 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
      WBPhenotype:0001434 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
        Remark: No defects when tested for response to glucose, CuSo4, 4M fructose, SDS and various volatile chemicals. Paper_evidence: WBPaper00003465
            Curator_confirmed: WBPerson291
        Affected_by: Molecule: WBMol:00005569 Paper_evidence: WBPaper00003465
              Curator_confirmed: WBPerson291
            WBMol:00003937 Paper_evidence: WBPaper00003465
              Curator_confirmed: WBPerson291
            WBMol:00002899 Paper_evidence: WBPaper00003465
              Curator_confirmed: WBPerson291
            WBMol:00003977 Paper_evidence: WBPaper00003465
              Curator_confirmed: WBPerson291
      WBPhenotype:0001765 Paper_evidence: WBPaper00031936
        Curator_confirmed: WBPerson2021
        Remark: Animals with mutations in individual G protein subunits respond normally to CO2 Paper_evidence: WBPaper00031936
            Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00031936
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: 10% CO2 Paper_evidence: WBPaper00031936
              Curator_confirmed: WBPerson2021
      WBPhenotype:0002535 Paper_evidence: WBPaper00003465
        Curator_confirmed: WBPerson291
  Reference: WBPaper00043908
    WBPaper00031936
    WBPaper00003465
  Method: Deletion_allele