WormBase Tree Display for Gene: WBGene00001668
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WBGene00001668 | SMap | S_parent | Sequence | F48C11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | gpa-6 | Person_evidence | WBPerson625 | |||||
Sequence_name | F48C11.1 | ||||||||
Molecular_name | F48C11.1 | ||||||||
F48C11.1.1 | |||||||||
CE20829 | |||||||||
Other_name | CELE_F48C11.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | gpa-6 | ||||||||
DB_info | Database | AceView | gene | XN811 | |||||
WormQTL | gene | WBGene00001668 | |||||||
WormFlux | gene | WBGene00001668 | |||||||
NDB | locus_tag | CELE_F48C11.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001668|UniProtKB=Q93743 | |||||||
family | PTHR10218 | ||||||||
NCBI | gene | 181442 | |||||||
RefSeq | protein | NM_077788.2 | |||||||
SwissProt | UniProtAcc | Q93743 | |||||||
UniProt_GCRP | UniProtAcc | Q93743 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gpa | ||||||||
Allele (72) | |||||||||
Strain | WBStrain00001769 | ||||||||
WBStrain00028950 | |||||||||
WBStrain00007863 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (17) | |||||||||
Ortholog (60) | |||||||||
Paralog (21) | |||||||||
Structured_description | Concise_description | gpa-6 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases that affects response to water-soluble odorants; it is expressed in AWA amphid neurons, the PHB sensory cell, and (at low levels) in ASI amphid neurons. | Curator_confirmed | WBPerson48 | |||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in axon and neuronal cell body. Expressed in ciliated neurons and head mesodermal cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F48C11.1 | |||||||
Corresponding_transcript | F48C11.1.1 | ||||||||
Other_sequence | EY471683.1 | ||||||||
Acan_isotig17261 | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result | WBRNAi00015238 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047732 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032477 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (11) | |||||||||
Drives_construct (17) | |||||||||
Construct_product | WBCnstr00001687 | ||||||||
WBCnstr00010202 | |||||||||
WBCnstr00036788 | |||||||||
WBCnstr00041552 | |||||||||
Antibody | WBAntibody00000772 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (106) | |||||||||
Interaction (29) | |||||||||
Map_info | Map | X | Position | 10.2255 | Error | 0.004146 | |||
Positive | Positive_clone | F48C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4372 | |||||||
Pseudo_map_position | |||||||||
Reference (24) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |