WormBase Tree Display for Gene: WBGene00001668
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| WBGene00001668 | SMap | S_parent | Sequence | F48C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-6 | Person_evidence | WBPerson625 | |||||
| Sequence_name | F48C11.1 | ||||||||
| Molecular_name | F48C11.1 | ||||||||
| F48C11.1.1 | |||||||||
| CE20829 | |||||||||
| Other_name | CELE_F48C11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gpa-6 | ||||||||
| DB_info | Database | AceView | gene | XN811 | |||||
| WormQTL | gene | WBGene00001668 | |||||||
| WormFlux | gene | WBGene00001668 | |||||||
| NDB | locus_tag | CELE_F48C11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001668|UniProtKB=Q93743 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 181442 | |||||||
| RefSeq | protein | NM_077788.2 | |||||||
| SwissProt | UniProtAcc | Q93743 | |||||||
| UniProt_GCRP | UniProtAcc | Q93743 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (72) | |||||||||
| Strain | WBStrain00001769 | ||||||||
| WBStrain00028950 | |||||||||
| WBStrain00007863 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (60) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-6 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases that affects response to water-soluble odorants; it is expressed in AWA amphid neurons, the PHB sensory cell, and (at low levels) in ASI amphid neurons. | Curator_confirmed | WBPerson48 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in axon and neuronal cell body. Expressed in ciliated neurons and head mesodermal cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48C11.1 | |||||||
| Corresponding_transcript | F48C11.1.1 | ||||||||
| Other_sequence | EY471683.1 | ||||||||
| Acan_isotig17261 | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015238 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047732 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032477 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct (17) | |||||||||
| Construct_product | WBCnstr00001687 | ||||||||
| WBCnstr00010202 | |||||||||
| WBCnstr00036788 | |||||||||
| WBCnstr00041552 | |||||||||
| Antibody | WBAntibody00000772 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000009051 | ||||||||
| WBInteraction000134041 | |||||||||
| WBInteraction000135227 | |||||||||
| WBInteraction000135540 | |||||||||
| WBInteraction000138034 | |||||||||
| WBInteraction000139079 | |||||||||
| WBInteraction000142058 | |||||||||
| WBInteraction000147253 | |||||||||
| WBInteraction000157192 | |||||||||
| WBInteraction000188101 | |||||||||
| WBInteraction000211536 | |||||||||
| WBInteraction000216538 | |||||||||
| WBInteraction000262280 | |||||||||
| WBInteraction000285935 | |||||||||
| WBInteraction000305260 | |||||||||
| WBInteraction000312487 | |||||||||
| WBInteraction000340650 | |||||||||
| WBInteraction000342690 | |||||||||
| WBInteraction000359177 | |||||||||
| WBInteraction000384782 | |||||||||
| WBInteraction000384849 | |||||||||
| WBInteraction000404691 | |||||||||
| WBInteraction000409428 | |||||||||
| WBInteraction000411013 | |||||||||
| WBInteraction000423781 | |||||||||
| WBInteraction000434671 | |||||||||
| WBInteraction000502422 | |||||||||
| WBInteraction000502424 | |||||||||
| WBInteraction000542826 | |||||||||
| Map_info | Map | X | Position | 10.2255 | Error | 0.004146 | |||
| Positive | Positive_clone | F48C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4372 | |||||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
