WormBase Tree Display for Variation: WBVar00177959
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WBVar00177959 | Name | Public_name | WBVar00177959 | ||
---|---|---|---|---|---|
Other_name | haw31209 | ||||
Y38E10A.6a.1:c.2233-251T>A | |||||
Y38E10A.6b.1:c.2239-251T>A | |||||
HGVSg | CHROMOSOME_II:g.12589460A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | |
Flanking_sequences | ttcgaaaactccgaaatttaccaat | tttaacgtagattttctgaaaaaaa | |||
Mapping_target | Y38E10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00012584 | |||
Transcript | Y38E10A.6b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.6b.1:c.2239-251T>A | ||||
Intron_number | 12/18 | ||||
Y38E10A.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.6a.1:c.2233-251T>A | ||||
Intron_number | 12/18 | ||||
Remark | [20081124 db] this Variation was previously named hw31209 | ||||
Method | WGS_Hawaiian_Waterston |