WormBase Tree Display for Variation: WBVar00144583
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| WBVar00144583 | Evidence | Paper_evidence | WBPaper00033464 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Public_name | e2123 | |||||||
| Other_name | CE34124:p.Cys131Tyr | ||||||||
| Y48A6C.5a.1:c.506G>A | |||||||||
| CE22115:p.Cys169Tyr | |||||||||
| Y48A6C.5b.1:c.392G>A | |||||||||
| HGVSg | CHROMOSOME_III:g.11132968G>A | ||||||||
| Sequence_details | SMap | S_parent | Sequence | Y48A6C | |||||
| Flanking_sequences | aaatacgaatcgaagactcaaaaagagtat | ctgtatgattaccgatgttcatcaagttat | |||||||
| Mapping_target | Y48A6C | ||||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00033464 | ||||
| SeqStatus | Sequenced | ||||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain (561) | |||||||||
| Laboratory | CB | ||||||||
| OH | |||||||||
| ZAS | |||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00305759 | |||||||
| WBGene00004010 | |||||||||
| WBGene00305760 | |||||||||
| Transcript | Y48A6C.12 | ||||||||
| Y48A6C.5b.1 (12) | |||||||||
| Y48A6C.11 | |||||||||
| Y48A6C.5a.1 (12) | |||||||||
| Interactor (11) | |||||||||
| Genetics | Interpolated_map_position | III | 6.13643 | ||||||
| Mapping_data | In_multi_point | 1248 | |||||||
| In_pos_neg_data | 5729 | ||||||||
| 5738 | |||||||||
| 5949 | |||||||||
| Description | Phenotype | WBPhenotype:0000050 | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | at 25C zygotic embryonic lethal | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Temperature_sensitive | Heat_sensitive | 25 | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000062 | Paper_evidence | WBPaper00032000 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Animals grow at 15C but not 25C. | Paper_evidence | WBPaper00032000 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000707 | Person_evidence | WBPerson261 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | pharynx fails to undergo late differentiation and morphogenesis; early pharynx development normal | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Temperature_sensitive | Heat_sensitive | 25 | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0000843 | Paper_evidence | WBPaper00032000 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Mating efficiency is reduced compared to wild type animals. | Paper_evidence | WBPaper00032000 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Life_stage | WBls:0000056 | PATO:0000460 | Paper_evidence | WBPaper00032000 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Reference (12) | |||||||||
| Method | Substitution_allele |
