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WormBase Tree Display for Variation: WBVar00144308

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Name Class

WBVar00144308NamePublic_namee1796
Other_nameF14F3.1a.2:c.686T>C
F14F3.1c.1:c.209T>C
CE28216:p.Ile43Thr
F14F3.1b.1:c.128T>C
CE24899:p.Ile229Thr
CE28217:p.Ile70Thr
F14F3.1a.1:c.686T>C
HGVSgCHROMOSOME_X:g.10516476T>C
Sequence_detailsSMapS_parentSequenceF14F3
Flanking_sequencesgaaacagaacctcgtttacgcaagtccagatgagagtcttgaaaaaggtgattaatttag
Mapping_targetF14F3
Type_of_mutationSubstitutiontc
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004472
LaboratoryCB
StatusLive
AffectsGeneWBGene00006870
TranscriptF14F3.1c.1 (12)
F14F3.1a.1 (12)
F14F3.1a.2 (12)
F14F3.1b.1 (12)
InteractorWBInteraction000008524
WBInteraction000008525
WBInteraction000008526
WBInteraction000008527
WBInteraction000008528
WBInteraction000008529
WBInteraction000008530
WBInteraction000502967
WBInteraction000502968
IsolationMutagenEMSPaper_evidenceWBPaper00002235
GeneticsInterpolated_map_positionX2.22447
Mapping_dataIn_2_point672
In_multi_point587
1638
2213
2214
2215
2216
In_pos_neg_data4703
DescriptionPhenotypeWBPhenotype:0000093Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkabnormal lineages for HO, H1, G1 and G2; Mig defects in DTCPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000195Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkMig defects in DTCPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
ReferenceWBPaper00014082
WBPaper00014771
WBPaper00014314
WBPaper00017246
RemarkIn addition to the curated lesion, e1796 also carries a T to A substitituion with flanking sequences of cctcgtttacgcaagtccagattgagagtc & tgagagtcttgaaaaaggtgattaatttag giving rise to a L(232)H mutation.Paper_evidenceWBPaper00002235
WBPaper00024640
MethodSubstitution_allele