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WormBase Tree Display for Variation: WBVar00144039

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Name Class

WBVar00144039EvidencePerson_evidenceWBPerson25803
NamePublic_namee1490
Other_nameD1086.4a.1:c.277-1G>A
HGVSgCHROMOSOME_V:g.14091472G>A
Sequence_detailsSMapS_parentSequenceD1086
Flanking_sequencesaaaacatggaattttactgattattttccagcaaagctccggaaagctaactccaagtat
Mapping_targetD1086
Type_of_mutationSubstitutionga
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000057
WBStrain00000058
WBStrain00000289
WBStrain00000293
WBStrain00000370
WBStrain00000371
WBStrain00000372
WBStrain00000386
WBStrain00000422
WBStrain00000423
WBStrain00000924
WBStrain00003996
WBStrain00004000
WBStrain00004347
WBStrain00004395
WBStrain00004423
WBStrain00004456
WBStrain00004468
WBStrain00004469
WBStrain00004470
WBStrain00004480
WBStrain00004492
WBStrain00004493
WBStrain00004513
WBStrain00004520
WBStrain00004532
WBStrain00004536
WBStrain00004537
WBStrain00004539
WBStrain00004544
WBStrain00004550
WBStrain00004555
WBStrain00004569
WBStrain00004574
WBStrain00004641
WBStrain00004712
WBStrain00004713
WBStrain00004736
WBStrain00004737
WBStrain00004758
WBStrain00004801
WBStrain00004802
WBStrain00004803
WBStrain00004804
WBStrain00004806
WBStrain00004807
WBStrain00004816
WBStrain00004819
WBStrain00004821
WBStrain00004825
WBStrain00004827
WBStrain00004829
WBStrain00004830
WBStrain00004923
WBStrain00004924
WBStrain00004925
WBStrain00004926
WBStrain00004927
WBStrain00004928
WBStrain00004929
WBStrain00004930
WBStrain00004931
WBStrain00004932
WBStrain00004933
WBStrain00004934
WBStrain00005056
WBStrain00005057
WBStrain00005058
WBStrain00005066
WBStrain00005145
WBStrain00005146
WBStrain00005147
WBStrain00005265
WBStrain00005637
WBStrain00005638
WBStrain00006269
WBStrain00006410
WBStrain00006847
WBStrain00006872
WBStrain00006893
WBStrain00006923
WBStrain00006928
WBStrain00006958
WBStrain00006960
WBStrain00006967
WBStrain00006968
WBStrain00006969
WBStrain00006970
WBStrain00007103
WBStrain00007153
WBStrain00007154
WBStrain00007155
WBStrain00007156
WBStrain00007157
WBStrain00007158
WBStrain00007159
WBStrain00007160
WBStrain00007161
WBStrain00007162
WBStrain00007163
WBStrain00007164
WBStrain00007165
WBStrain00007166
WBStrain00007167
WBStrain00007168
WBStrain00007169
WBStrain00007170
WBStrain00007171
WBStrain00007172
WBStrain00007174
WBStrain00007175
WBStrain00007176
WBStrain00007177
WBStrain00007178
WBStrain00007179
WBStrain00007180
WBStrain00007181
WBStrain00007182
WBStrain00007183
WBStrain00007184
WBStrain00007186
WBStrain00007187
WBStrain00007188
WBStrain00007189
WBStrain00007190
WBStrain00007191
WBStrain00007192
WBStrain00007193
WBStrain00007194
WBStrain00007195
WBStrain00007196
WBStrain00007368
WBStrain00007450
WBStrain00007451
WBStrain00007713
WBStrain00007740
WBStrain00008464
WBStrain00008576
WBStrain00008577
WBStrain00008579
WBStrain00008580
WBStrain00008581
WBStrain00008582
WBStrain00008583
WBStrain00008584
WBStrain00008586
WBStrain00008587
WBStrain00008589
WBStrain00008590
WBStrain00008592
WBStrain00008593
WBStrain00008596
WBStrain00008597
WBStrain00008599
WBStrain00008600
WBStrain00008602
WBStrain00008603
WBStrain00008612
WBStrain00022479
WBStrain00022625
WBStrain00022626
WBStrain00022834
WBStrain00022835
WBStrain00022837
WBStrain00023475
WBStrain00024033
WBStrain00024073
WBStrain00024074
WBStrain00026510
WBStrain00026521
WBStrain00026974
WBStrain00027124
WBStrain00027126
WBStrain00027127
WBStrain00027148
WBStrain00027149
WBStrain00027150
WBStrain00027222
WBStrain00027235
WBStrain00028751
WBStrain00029135
WBStrain00029137
WBStrain00029145
WBStrain00029146
WBStrain00029147
WBStrain00029148
WBStrain00029149
WBStrain00029150
WBStrain00029151
WBStrain00029152
WBStrain00029153
WBStrain00029160
WBStrain00029162
WBStrain00029163
WBStrain00029164
WBStrain00029165
WBStrain00029166
WBStrain00029167
WBStrain00029171
WBStrain00029280
WBStrain00029281
WBStrain00029307
WBStrain00029323
WBStrain00029325
WBStrain00029365
WBStrain00029475
WBStrain00029554
WBStrain00029577
WBStrain00029593
WBStrain00029595
WBStrain00029597
WBStrain00029684
WBStrain00029711
WBStrain00029715
WBStrain00029716
WBStrain00029717
WBStrain00029718
WBStrain00029721
WBStrain00029727
WBStrain00029729
WBStrain00029730
WBStrain00029731
WBStrain00029734
WBStrain00029735
WBStrain00029751
WBStrain00029752
WBStrain00029753
WBStrain00029758
WBStrain00029759
WBStrain00029760
WBStrain00029761
WBStrain00029762
WBStrain00029763
WBStrain00029764
WBStrain00029765
WBStrain00029766
WBStrain00029767
WBStrain00029768
WBStrain00029769
WBStrain00029771
WBStrain00029779
WBStrain00029783
WBStrain00029784
WBStrain00029785
WBStrain00029786
WBStrain00029787
WBStrain00029788
WBStrain00029789
WBStrain00029790
WBStrain00029791
WBStrain00029792
WBStrain00029793
WBStrain00029794
WBStrain00029795
WBStrain00029796
WBStrain00029797
WBStrain00029798
WBStrain00029799
WBStrain00029800
WBStrain00029801
WBStrain00029802
WBStrain00029803
WBStrain00029804
WBStrain00029805
WBStrain00029806
WBStrain00029807
WBStrain00029808
WBStrain00029809
WBStrain00029810
WBStrain00029811
WBStrain00029812
WBStrain00029813
WBStrain00029814
WBStrain00029815
WBStrain00029816
WBStrain00029817
WBStrain00029818
WBStrain00029819
WBStrain00029820
WBStrain00029821
WBStrain00029822
WBStrain00029823
WBStrain00029824
WBStrain00029826
WBStrain00029827
WBStrain00029828
WBStrain00029829
WBStrain00029831
WBStrain00029832
WBStrain00029833
WBStrain00029834
WBStrain00029835
WBStrain00029836
WBStrain00029837
WBStrain00029838
WBStrain00029839
WBStrain00029840
WBStrain00029841
WBStrain00029842
WBStrain00029843
WBStrain00029844
WBStrain00029845
WBStrain00029846
WBStrain00029847
WBStrain00029848
WBStrain00029849
WBStrain00029850
WBStrain00029851
WBStrain00029852
WBStrain00029870
WBStrain00029871
WBStrain00029872
WBStrain00029873
WBStrain00029874
WBStrain00029875
WBStrain00029876
WBStrain00029877
WBStrain00029878
WBStrain00029879
WBStrain00029880
WBStrain00029881
WBStrain00029882
WBStrain00029883
WBStrain00029884
WBStrain00029885
WBStrain00029886
WBStrain00029887
WBStrain00029888
WBStrain00029889
WBStrain00029890
WBStrain00029891
WBStrain00029892
WBStrain00029893
WBStrain00029894
WBStrain00029895
WBStrain00029896
WBStrain00029897
WBStrain00029900
WBStrain00029901
WBStrain00029904
WBStrain00029907
WBStrain00029908
WBStrain00029909
WBStrain00029910
WBStrain00029911
WBStrain00029912
WBStrain00029913
WBStrain00029914
WBStrain00029915
WBStrain00029916
WBStrain00029917
WBStrain00029918
WBStrain00029920
WBStrain00029921
WBStrain00029922
WBStrain00029923
WBStrain00029934
WBStrain00030542
WBStrain00030543
WBStrain00030544
WBStrain00030806
WBStrain00030814
WBStrain00030819
WBStrain00030823
WBStrain00030824
WBStrain00030847
WBStrain00030868
WBStrain00030872
WBStrain00030873
WBStrain00030874
WBStrain00030878
WBStrain00030879
WBStrain00030885
WBStrain00030886
WBStrain00030888
WBStrain00030918
WBStrain00030919
WBStrain00030921
WBStrain00030930
WBStrain00030937
WBStrain00030939
WBStrain00030942
WBStrain00030944
WBStrain00030949
WBStrain00030953
WBStrain00030962
WBStrain00030968
WBStrain00030969
WBStrain00030972
WBStrain00030973
WBStrain00030975
WBStrain00030976
WBStrain00030977
WBStrain00030978
WBStrain00030979
WBStrain00030980
WBStrain00031062
WBStrain00031063
WBStrain00031066
WBStrain00031067
WBStrain00031068
WBStrain00031069
WBStrain00031070
WBStrain00031071
WBStrain00031073
WBStrain00031118
WBStrain00031120
WBStrain00031313
WBStrain00031314
WBStrain00031315
WBStrain00033367
WBStrain00034092
WBStrain00034115
WBStrain00034116
WBStrain00034117
WBStrain00034398
WBStrain00034438
WBStrain00034486
WBStrain00034487
WBStrain00035059
WBStrain00035060
WBStrain00035061
WBStrain00035426
WBStrain00035427
WBStrain00035428
WBStrain00040522
WBStrain00042531
WBStrain00047126
WBStrain00047130
WBStrain00047131
WBStrain00047132
WBStrain00047133
WBStrain00047135
WBStrain00047138
WBStrain00047139
WBStrain00047321
WBStrain00047322
WBStrain00047400
WBStrain00047409
WBStrain00047411
WBStrain00047412
WBStrain00047413
WBStrain00047815
WBStrain00049322
WBStrain00049794
WBStrain00050643
WBStrain00051571
WBStrain00051719
WBStrain00051836
WBStrain00051867
WBStrain00054633
WBStrain00054634
WBStrain00054635
WBStrain00054733
WBStrain00054877
WBStrain00054878
WBStrain00054879
WBStrain00055010
WBStrain00055023
WBStrain00055026
WBStrain00055029
WBStrain00055030
WBStrain00055031
WBStrain00055032
WBStrain00055033
WBStrain00055048
WBStrain00055325
WBStrain00055329
WBStrain00055334
WBStrain00055790
WBStrain00055794
WBStrain00055796
WBStrain00055797
WBStrain00056426
WBStrain00056427
WBStrain00056428
WBStrain00056429
WBStrain00056434
WBStrain00056436
WBStrain00056437
WBStrain00056438
WBStrain00056439
WBStrain00056442
WBStrain00056443
WBStrain00056444
WBStrain00056446
WBStrain00056447
WBStrain00056448
WBStrain00056452
WBStrain00056453
WBStrain00056454
WBStrain00056455
WBStrain00056456
WBStrain00056457
WBStrain00056458
WBStrain00056459
WBStrain00056460
WBStrain00056461
WBStrain00056462
WBStrain00056463
WBStrain00056465
WBStrain00056466
WBStrain00056467
WBStrain00056468
WBStrain00056469
WBStrain00056470
WBStrain00056474
WBStrain00056475
WBStrain00056476
WBStrain00056477
WBStrain00056478
WBStrain00056480
WBStrain00056481
WBStrain00056482
WBStrain00056483
WBStrain00056487
LaboratoryCB
HZ
OH
AD
DR
SL
ARK
CHB
StatusLive
AffectsGeneWBGene00001864
TranscriptD1086.4a.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScD1086.4a.1:c.277-1G>A
Intron_number4/8
InteractorWBInteraction000501188
GeneticsInterpolated_map_positionV6.09222
Mapping_dataIn_2_point6177
In_multi_point (16)
In_pos_neg_data1761
4301
DescriptionPhenotypeWBPhenotype:0000044Paper_evidenceWBPaper00049555
Curator_confirmedWBPerson137
WBPhenotype:0000050Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
Remark14.1% eggs never hatch, yet are refractile; wild type animals produce 0.8% inviable zygotes.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0000057Paper_evidenceWBPaper00049555
Curator_confirmedWBPerson137
WBPhenotype:0000154Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkAnimals segregate a small percentage (0.8%) of short animals shown to be 3X hermaphrodites (wild type segregates 0.04% 3X herm.).Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0000351Paper_evidenceWBPaper00003719
Curator_confirmedWBPerson48
RemarkX-aneuploid progeny fail to hatch (see Hodgkin et. al. 1979).Paper_evidenceWBPaper00003719
Curator_confirmedWBPerson48
PenetranceLowPaper_evidenceWBPaper00003719
Curator_confirmedWBPerson48
Range55Paper_evidenceWBPaper00003719
Curator_confirmedWBPerson48
WBPhenotype:0000863Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkMales exhibit 55.2% wild type fertility.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0001175Paper_evidenceWBPaper00000179
WBPaper00048917
WBPaper00049555
Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPerson721
WBPerson137
RemarkAnimals segregate 32.9% males compared to 0.3% segregated by wild type animals.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
stronger allele : 33% Him at 20CPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Phenotype_assayTemperature20Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0001583Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkAnimals segregate a small percentage (6.7%) of short animals shown to be 3X hermaphrodites (wild type segregates 0.04% 3X herm.).Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000057PATO:0000460Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000517Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkAnimals are indistinguishable from wild type in terms of behavior.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0000520Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkBoth hermaphrodites and males are indistinguishable from wild type in terms of superficial anatomy.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0000843Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
RemarkMating efficiency is not significantly different from control animals.Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
Phenotype_assayTreatmentFor each trial, six males and two dpy-17(e904) hermaphrodites were placed on a plate.Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
WBPhenotype:0001426Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
Phenotype_assayGenotypearIs37Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
WBPhenotype:0001431Paper_evidenceWBPaper00027716
Curator_confirmedWBPerson48
Phenotype_assayTemperature25Paper_evidenceWBPaper00027716
Curator_confirmedWBPerson48
WBPhenotype:0001522Paper_evidenceWBPaper00031871
Curator_confirmedWBPerson712
RemarkSpicules of non-mating males remained in the normal retracted position. Treatment with a dihydropiridine (DHP) analog did not elicit continuous spicule protraction.Paper_evidenceWBPaper00031871
Curator_confirmedWBPerson712
EQ_annotationsAnatomy_termWBbt:0005312PATO:0000460Paper_evidenceWBPaper00031871
Curator_confirmedWBPerson712
Life_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00031871
Curator_confirmedWBPerson712
Phenotype_assayTreatmentnemadipinePaper_evidenceWBPaper00031871
Curator_confirmedWBPerson712
WBPhenotype:0001631Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
RemarkThe sex ratio of cross progeny sired by him males does not significantly differ from 1:1.Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00000179
Curator_confirmedWBPerson712
WBPhenotype:0002140Paper_evidenceWBPaper00032050
Curator_confirmedWBPerson712
RemarkMales responded to ascr#3, an ascaroside, in male attraction assays.Paper_evidenceWBPaper00032050
Curator_confirmedWBPerson712
WBPhenotype:0002535Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
RemarkAnimals do not exhibit DiI filling defects.Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
WBPhenotype:0004004Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
RemarkMale response efficiency was not significantly different from control animals.Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
Phenotype_assayTreatmentEach trial consists of 10-25 males. Males were assayed 4 minutes after contact.Paper_evidenceWBPaper00031689
Curator_confirmedWBPerson712
Reference (58)
Remarkalt_det = g to a mut_det = ag to aaPerson_evidenceWBPerson25803
Curator_confirmedWBPerson51134
Variation information submitted by WBPerson25803 on 2023-10-13_08:12:53 via the Allele submission form.Curator_confirmedWBPerson51134
MethodSubstitution_allele