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WormBase Tree Display for Variation: WBVar00099908

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Name Class

WBVar00099908NamePublic_nameWBVar00099908
Other_namepas4767
cewivar00061559
F31B12.1l.1:c.36+499C>T
F31B12.1h.1:c.36+499C>T
F31B12.1g.1:c.36+499C>T
F31B12.1k.1:c.36+499C>T
F31B12.1j.1:c.36+499C>T
F31B12.1d.1:c.36+499C>T
F31B12.1i.1:c.36+499C>T
HGVSgCHROMOSOME_X:g.10838116G>A
Sequence_detailsSMapS_parentSequenceC05A9
Flanking_sequencesgggggatggagtcgcaaaagggaaagatgagctatctgttttactactgtccgattgttatcttataactccaataaataaaacaattgacatgaagaaaacaaacggaacttagaaagctgaaatttctgaagcaacattcgacaattttgaataatatttatcagtattacgtttgaaaatgaatatacatattcaacctttttctatttggaaaagttgtatgtattccagttttgaaaaaatgaaagtaacgctatgtttttttgtatttcatttcctttttaaacattggtgtgtcacttttagaattactgtagagattttgagtgcacatcgtcacaatgttatttttgtttttttttaaacattcattatgaacaataaacagaacccgattacataaaatgcagaatttttggaaaaaaggtgtaaattaggaacaaaaaagagacaacgggaaaaagagatttacgaacaaaatctctacagtaattttaaaagagtacccacaaattttaaaaataaacttgccaagacaaatccgcaaagaatgcgtgtaaaaaaatcttgtttgtaaacttattctcactatcactc
Mapping_targetC05A9
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (18)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004036
TranscriptF31B12.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1j.1:c.36+499C>T
Intron_number1/63
F31B12.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1g.1:c.36+499C>T
Intron_number1/63
F31B12.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1d.1:c.36+499C>T
Intron_number1/64
F31B12.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1h.1:c.36+499C>T
Intron_number1/63
F31B12.1l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1l.1:c.36+499C>T
Intron_number1/63
F31B12.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1i.1:c.36+499C>T
Intron_number1/64
F31B12.1k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1k.1:c.36+499C>T
Intron_number1/64
MethodWGS_Pasadena_Quinlan