WormBase Tree Display for Variation: WBVar00099908

WBVar00099908 Name: Public_name: WBVar00099908
    Other_name: pas4767
      cewivar00061559
      F31B12.1l.1:c.36+499C>T
      F31B12.1h.1:c.36+499C>T
      F31B12.1g.1:c.36+499C>T
      F31B12.1k.1:c.36+499C>T
      F31B12.1j.1:c.36+499C>T
      F31B12.1d.1:c.36+499C>T
      F31B12.1i.1:c.36+499C>T
    HGVSg: CHROMOSOME_X:g.10838116G>A
  Sequence_details: SMap: S_parent: Sequence: C05A9
    Flanking_sequences: gggggatggagtcgcaaaagggaaagatgagctatctgttttactactgtccgattgttatcttataactccaataaataaaacaattgacatgaagaaaacaaacggaacttagaaagctgaaatttctgaagcaacattcgacaattttgaataatatttatcagtattacgtttgaaaatgaatatacatattcaacctttttctatttggaaaagttgtatgtattccagttttgaaaaaatgaaagtaacgctatgtttttttgtatttcatttcctttttaaacattggtgtgt cacttttagaattactgtagagattttgagtgcacatcgtcacaatgttatttttgtttttttttaaacattcattatgaacaataaacagaacccgattacataaaatgcagaatttttggaaaaaaggtgtaaattaggaacaaaaaagagacaacgggaaaaagagatttacgaacaaaatctctacagtaattttaaaagagtacccacaaattttaaaaataaacttgccaagacaaatccgcaaagaatgcgtgtaaaaaaatcttgtttgtaaacttattctcactatcactc
    Mapping_target: C05A9
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000032 From_analysis: Million_mutation_project_reanalysis
      WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006631 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023192 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023665 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00004036
    Transcript: F31B12.1j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1j.1:c.36+499C>T
        Intron_number: 1/63
      F31B12.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1g.1:c.36+499C>T
        Intron_number: 1/63
      F31B12.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1d.1:c.36+499C>T
        Intron_number: 1/64
      F31B12.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1h.1:c.36+499C>T
        Intron_number: 1/63
      F31B12.1l.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1l.1:c.36+499C>T
        Intron_number: 1/63
      F31B12.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1i.1:c.36+499C>T
        Intron_number: 1/64
      F31B12.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31B12.1k.1:c.36+499C>T
        Intron_number: 1/64
  Method: WGS_Pasadena_Quinlan