WormBase Tree Display for Variation: WBVar00095130

WBVar00095130 Evidence: Paper_evidence: WBPaper00004715
  Name: Public_name: p813
    Other_name: CE28361:p.Gln479Ter
      Y41G9A.1.1:c.1435C>T
    HGVSg: CHROMOSOME_X:g.2988002C>T
  Sequence_details: SMap: S_parent: Sequence: Y41G9A
    Flanking_sequences: gaccgctataatgcgcatgctcaagtcaac aaggcaacattgcgtacatgaacggcgatt
    Mapping_target: Y41G9A
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00030797
    Laboratory: PR
    Status: Live
  Affects: Gene: WBGene00003885
    Transcript: Y41G9A.1.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y41G9A.1.1:c.1435C>T
        HGVSp: CE28361:p.Gln479Ter
        cDNA_position: 1450
        CDS_position: 1435
        Protein_position: 479
        Exon_number: 11/17
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
    Interactor: WBInteraction000500417
      WBInteraction000502137
  Genetics: Interpolated_map_position: X -12.6622
    Mapping_data: In_2_point: 376
        377
        3384
      In_multi_point: 1209
        1210
        1211
        1212
      In_pos_neg_data: 3180
        5450
  Description: Phenotype (23)
    Phenotype_not_observed: WBPhenotype:0000067 Paper_evidence: WBPaper00003582
        Curator_confirmed: WBPerson712
        Remark: mutants showed a normal feeding inhibition response when exposed to either cadmium or captan Paper_evidence: WBPaper00003582
            Curator_confirmed: WBPerson712
      WBPhenotype:0000315 Paper_evidence: WBPaper00000932
          WBPaper00000082
        Curator_confirmed: WBPerson712
        Remark: Animals showed normal sensitivity to light head and tail tapping with a human eyelash. Paper_evidence: WBPaper00000082
            Curator_confirmed: WBPerson712
      WBPhenotype:0000478 Paper_evidence: WBPaper00000932
          WBPaper00000082
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Animals were able to track isothermally. Paper_evidence: WBPaper00000082
            Curator_confirmed: WBPerson712
          normal thermotaxis Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000643 Paper_evidence: WBPaper00000082
        Curator_confirmed: WBPerson712
        Remark: Animals moved normally. Paper_evidence: WBPaper00000082
            Curator_confirmed: WBPerson712
      WBPhenotype:0001015 Paper_evidence: WBPaper00000082
        Curator_confirmed: WBPerson712
        Remark: Animals did not display any major developmental defects compared to N2 animals. Paper_evidence: WBPaper00000082
            Curator_confirmed: WBPerson712
      WBPhenotype:0001741 Paper_evidence: WBPaper00032000
        Curator_confirmed: WBPerson712
        Remark: Males displayed no spontaneous spicule-muscle seizures in the presence or absence of food. Paper_evidence: WBPaper00032000
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0005826 PATO:0000460 Paper_evidence: WBPaper00032000
                Curator_confirmed: WBPerson712
            WBbt:0005312 PATO:0000460 Paper_evidence: WBPaper00032000
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000056 PATO:0000460 Paper_evidence: WBPaper00032000
                Curator_confirmed: WBPerson712
        Phenotype_assay: Treatment: To effect food deprivation animals were moved to plates with no food (E. coli) or fed inedible bacteria (aztreonam-treated E. coli). Paper_evidence: WBPaper00032000
              Curator_confirmed: WBPerson712
      WBPhenotype:0001765 Paper_evidence: WBPaper00031936
        Curator_confirmed: WBPerson2021
        Remark: Mutants respond normally to CO2 Paper_evidence: WBPaper00031936
            Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000057 PATO:0000460 Paper_evidence: WBPaper00031936
                Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: 10% CO2 Paper_evidence: WBPaper00031936
              Curator_confirmed: WBPerson2021
  Reference (20)
  Remark: Created by WBPerson51134 from the NN_VFP_triage_pipeline
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
  Method: Substitution_allele