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WormBase Tree Display for Variation: WBVar00089738

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Name Class

WBVar00089738EvidencePaper_evidenceWBPaper00001949
NamePublic_namen767
Other_nameZK678.1.1:c.994_1113delinsAAAAAAAAAAAA
CE15383:p.Arg332_Ter371delinsLysLysLysLys
HGVSgCHROMOSOME_X:g.15734038_15734215delinsAAAAAAAAAAAA
Sequence_detailsSMapS_parentSequenceZK678
Flanking_sequencestcattcaagaattccattaaatcttattacaatcataatcttagcctcagtgatgctgat
Mapping_targetZK678
Type_of_mutationInsertionaaaaaaaaaaaaPaper_evidenceWBPaper00001949
Deletion
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00026879
WBStrain00026900
WBStrain00027237
WBStrain00027359
WBStrain00027374
WBStrain00027399
WBStrain00027524
WBStrain00027555
WBStrain00027561
LaboratoryMT
StatusLive
Linked_toWBVar02143804
AffectsGeneWBGene00023498
TranscriptZK678.1.1 (11)
Interactor (112)
GeneticsInterpolated_map_positionX22.9461
Mapping_dataIn_multi_point2660
DescriptionPhenotypeWBPhenotype:0000425Paper_evidenceWBPaper00037906
Curator_confirmedWBPerson712
RemarkLIN-15A nuclear staining is greatly reduced in these mutants.Paper_evidenceWBPaper00037906
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000059Paper_evidenceWBPaper00038168
Curator_confirmedWBPerson712
RemarkAnimals do not show larval arrest at 24 or 26 deg C.Paper_evidenceWBPaper00038168
Curator_confirmedWBPerson712
WBPhenotype:0000134Paper_evidenceWBPaper00037906
Curator_confirmedWBPerson712
RemarkLIN-15A RNA levels are not reduced in these mutants compared to wild type, as measured through RT-PCR.Paper_evidenceWBPaper00037906
Curator_confirmedWBPerson712
WBPhenotype:0000700Paper_evidenceWBPaper00038257
Curator_confirmedWBPerson712
WBPhenotype:0000886Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkclass A allele, wildtype alone, Muv in homozygotes with lin-9,35,36,37Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0001258Paper_evidenceWBPaper00027135
Curator_confirmedWBPerson557
Reference (20)
RemarkIn addition to the deletion and insertion described, allele n767 is comprised of an insertion of an A after the 6th base of the initial insertion and a G to A substitution at the 19th base after this second insertion.Paper_evidenceWBPaper00001949
MethodDeletion_and_insertion_allele