WormBase Tree Display for Variation: WBVar00089691

WBVar00089691 Evidence: Paper_evidence: WBPaper00001768
  Name: Public_name: n709
    Other_name: C07H6.7.2:c.-1G>A
      C07H6.7.1:c.1-1G>A
    HGVSg: CHROMOSOME_III:g.7534701C>T
  Sequence_details: SMap: S_parent: Sequence: C07H6
    Flanking_sequences: tatcaatcactttcactcgttttcactcca atgaccacatcaacatcaccgtcatccaca
    Mapping_target: C07H6
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00001768
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00026857
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00003024
    Transcript: C07H6.7.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C07H6.7.2:c.-1G>A
        cDNA_position: 105
        Exon_number: 1/7
      C07H6.7.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: C07H6.7.1:c.1-1G>A
        Intron_number: 1/6
    Interactor: WBInteraction000002755
      WBInteraction000002764
      WBInteraction000500077
      WBInteraction000500078
      WBInteraction000521976
      WBInteraction000535543
      WBInteraction000535544
  Genetics: Interpolated_map_position: III -0.673654
  Description: Phenotype (21)
    Phenotype_not_observed: WBPhenotype:0000099 Paper_evidence: WBPaper00005344
        Curator_confirmed: WBPerson2987
        Remark: The lin-39(n709) mutation did not induce the "2 P11.p" phenotype where the P12 cell adopts a P11 cell fate Paper_evidence: WBPaper00005344
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001816 Paper_evidence: WBPaper00032221
        Curator_confirmed: WBPerson712
        Remark: Egg-laying events were still strongly correlated with HSN activity. Paper_evidence: WBPaper00032221
            Curator_confirmed: WBPerson712
        Temperature_sensitive: Heat_sensitive: Paper_evidence: WBPaper00032221
              Curator_confirmed: WBPerson712
        Phenotype_assay: Treatment: Combined fluorescent and visible microscopy was used to view both the Ca2+ signal and egg-laying events simultaneously. Animals were assayed 24 hr after the late fourth larval (L4) stage at 20.5C 0.5C. Paper_evidence: WBPaper00032221
              Curator_confirmed: WBPerson712
          Genotype: Cameleon IjIs25[myo-3::YC2.0] Paper_evidence: WBPaper00032221
              Curator_confirmed: WBPerson712
  Reference: WBPaper00043908
    WBPaper00005277
    WBPaper00005344
    WBPaper00016118
    WBPaper00014076
    WBPaper00032221
    WBPaper00016177
    WBPaper00015250
    WBPaper00005609
  Method: Substitution_allele