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WormBase Tree Display for Variation: WBVar00052249

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Name Class

WBVar00052249EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00052249
Other_namecbs37154
cb37154Paper_evidenceWBPaper00055507
HGVSgchrV:g.7246537C>T
Sequence_detailsSMapS_parentSequencecb25.fpc0156
Flanking_sequencesaattctctgactttttgaacctccggacaaaaaatgcaaaaatgtagcac
Mapping_targetcb25.fpc0156
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (16)
Polymorphic_strain_digest (16)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00028907
TranscriptCBG06663b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG06663b.1:c.147+542C>T
Intron_number4/8
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v1.0, ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP