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WormBase Tree Display for Gene: WBGene00028907

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Name Class

WBGene00028907SMapS_parentSequencecb25.fpc0156
IdentityVersion2
NameCGC_nameCbr-unc-132From_analysisInferred_from_orthology
Sequence_nameCBG06663
Molecular_nameCBG06663a
CBG06663a.1
CBP36820
CBG06663b
CBP01726
CBG06663b.1
Other_nameCBG_06663Accession_evidenceNDBHE601320
Public_nameCbr-unc-132
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
222 Nov 2011 16:34:04WBPerson2970Name_changeCGC_nameCbr-unc-132
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00052249
WBVar00111585
WBVar00052254
WBVar00111586
WBVar00052259
WBVar00052264
RNASeq_FPKMWBls:000000276.9331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
84.9866From_analysisRNASeq.briggsae.WBls:0000002.control_mean
85.5103From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
92.5164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
123.81From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
89.0134From_analysisRNASeq.briggsae.WBls:0000002.control_median
94.6925From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000356.3414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
61.0014From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
65.6614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
64.9892From_analysisRNASeq.briggsae.WBls:0000003.control_mean
72.9648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000427.1776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
27.7454From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
28.3133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.8799From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.4532From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.8736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
40.0216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002716.4634From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
23.8563From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.97371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
50.1317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
30.5798From_analysisRNASeq.briggsae.WBls:0000027.control_mean
33.2976From_analysisRNASeq.briggsae.WBls:0000027.control_median
50.7505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003551.523From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003833.7316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
51.8496From_analysisRNASeq.briggsae.WBls:0000038.control_mean
53.0601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
54.8498From_analysisRNASeq.briggsae.WBls:0000038.control_median
56.6395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
63.9671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041102.357From_analysisRNASeq.briggsae.WBls:0000041.control_mean
106.414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
109.578From_analysisRNASeq.briggsae.WBls:0000041.control_median
112.743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
112.795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
77.4773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
81.8214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
90.378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
96.9381From_analysisRNASeq.briggsae.WBls:0000041.control_mean
98.396From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063103.779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
107.398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
81.1069From_analysisRNASeq.briggsae.WBls:0000063.control_mean
96.3739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
97.9837From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
82.3222From_analysisRNASeq.briggsae.WBls:0000063.control_mean
88.3985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
97.1788From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010164.1939From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
65.6614From_analysisRNASeq.briggsae.total_over_all_stages.control_median
65.1717From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
68.525From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CYTH-like domain superfamily; NadR/Ttd14, AAA domain; P-loop containing nucleoside triphosphate hydrolase; and AAA domain. Is an ortholog of C. elegans unc-132.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06663a
CBG06663b
Corresponding_CDS_historyCBG06663:bp194
Corresponding_transcriptCBG06663a.1
CBG06663b.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1060930
Microarray_resultsGPL8303_CB6_WBGene00028907_A
GPL8303_CB6_WBGene00028907_B
GPL14143_CBG06663_1078-1137_0.956_1_C
GPL14143_CBG06663_1103-1162_0.954_3_B
GPL14143_CBG06663_1378-1437_0.843_65_A
MethodGene