WormBase Tree Display for Variation: WBVar00050963

WBVar00050963 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00050963
    Other_name: pas2552
      haw41315
      haw142056
      cewivar00104005
      Y71H2AM.5.2:c.-5+35051T>A
      Y71H2AM.13.1:c.1466+234A>T
    HGVSg: CHROMOSOME_III:g.2734735T>A
  Sequence_details: SMap: S_parent: Sequence: Y71H2AM
    Flanking_sequences: ttgaatttcgcgcgctaaaataaac ttttaggttttgattgtggaaaaag
    Mapping_target: Y71H2AM
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00561921
        WBVar00097693
    Status: Live
  Affects: Gene: WBGene00022170
      WBGene00022178
    Transcript: Y71H2AM.5.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.5.2:c.-5+35051T>A
        Intron_number: 1/5
      Y71H2AM.13.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71H2AM.13.1:c.1466+234A>T
        Intron_number: 9/10
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw41315
  Method: WGS_Hawaiian_Waterston