WormBase Tree Display for Gene: WBGene00022170
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| WBGene00022170 | SMap | S_parent | Sequence | Y71H2AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cox-6B | Person_evidence | WBPerson117 | |||||
| WBPerson7169 | |||||||||
| Sequence_name | Y71H2AM.5 | ||||||||
| Molecular_name | Y71H2AM.5 | ||||||||
| Y71H2AM.5.1 | |||||||||
| CE22939 | |||||||||
| Y71H2AM.5.2 | |||||||||
| Other_name | CELE_Y71H2AM.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cox-6B | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Sep 2017 13:25:30 | WBPerson2970 | Name_change | CGC_name | cox-6B | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cox | ||||||||
| Allele (2599) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091841 | ||||||||
| 00091842 | |||||||||
| 00126343 | |||||||||
| 00126344 | |||||||||
| Contained_in_operon | CEOP3084 | ||||||||
| Ortholog (42) | |||||||||
| Structured_description | Automated_description | Predicted to be located in mitochondrion. Predicted to be part of respiratory chain complex IV. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Is an ortholog of human COX6B1 (cytochrome c oxidase subunit 6B1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070494 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2280) | ||||
| Molecular_info | Corresponding_CDS | Y71H2AM.5 | |||||||
| Corresponding_transcript | Y71H2AM.5.1 | ||||||||
| Y71H2AM.5.2 | |||||||||
| Other_sequence (129) | |||||||||
| Associated_feature | WBsf644999 | ||||||||
| WBsf224549 | |||||||||
| WBsf224550 | |||||||||
| WBsf224551 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1011684 | ||||||||
| Expr1039771 | |||||||||
| Expr1161668 | |||||||||
| Expr2008327 | |||||||||
| Expr2026567 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | III | Position | -10.73 | |||||
| Positive | Positive_clone | Y71H2AM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040938 | |||||||||
| WBPaper00046494 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-10.1707) | |||||||||
| Method | Gene |
