WormBase Tree Display for Variation: WBVar00016450
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WBVar00016450 | Name | Public_name | WBVar00016450 | ||
---|---|---|---|---|---|
Other_name | haw84388 | ||||
cewivar00244427 | |||||
Y40H4A.1a.1:c.-19-2127A>T | |||||
Y40H4A.1a.3:c.-19-2127A>T | |||||
HGVSg | CHROMOSOME_V:g.14572121T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y40H4A | |
Flanking_sequences | ttggggacgcaaggtttgagaactc | ttttggaacaacttattcttagaaa | |||
Mapping_target | Y40H4A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001519 | |||
Transcript | Y40H4A.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1a.1:c.-19-2127A>T | ||||
Intron_number | 2/12 | ||||
Y40H4A.1a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1a.3:c.-19-2127A>T | ||||
Intron_number | 1/11 | ||||
Remark | [20081124 db] this Variation was previously named hw84388 | ||||
Method | WGS_Hawaiian_Waterston |