WormBase Tree Display for Variation: WBVar00000089

WBVar00000089 Name: Public_name: ad1116
    Other_name: Y48B6A.4.1:c.806-1G>A
    HGVSg: CHROMOSOME_II:g.14169168C>T
  Sequence_details: SMap: S_parent: Sequence: Y48B6A
    Flanking_sequences: atgagaagtaaattgaaaattcacaattca aaatcacaaacttcctatccgtgatggtatt
    Mapping_target: Y48B6A
    Type_of_mutation: Substitution: g a Person_evidence: WBPerson32
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00005548
    Component_of_genotype: WBGenotype00000131
    Laboratory: DA
    Status: Live
  Affects: Gene: WBGene00001133
    Transcript: Y48B6A.4.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: Y48B6A.4.1:c.806-1G>A
        Intron_number: 4/7
    Interactor (34)
  Genetics: Interpolated_map_position: II 22.4739
  Description: Phenotype (16)
    Phenotype_not_observed: WBPhenotype:0001068 Paper_evidence: WBPaper00031241
        Curator_confirmed: WBPerson712
        Remark: Pre-exposure to mianserin blocked serotonin-induced egg laying as it does in N2. Paper_evidence: WBPaper00031241
            Curator_confirmed: WBPerson712
        Phenotype_assay: Treatment: Pre-exposure to 50uM mianserin. Paper_evidence: WBPaper00031241
              Curator_confirmed: WBPerson712
      WBPhenotype:0002087 Paper_evidence: WBPaper00031326
        Curator_confirmed: WBPerson2857
        Remark: growth in hydrogen sulfide enhances thermotolerance relative to untreated animals Paper_evidence: WBPaper00031326
            Curator_confirmed: WBPerson2857
  Reference (19)
  Remark: This sequence alteration has not been confirmed. Person_evidence: WBPerson32
  Method: Substitution_allele