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WormBase Tree Display for Variation: WBVar00000089

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Name Class

WBVar00000089NamePublic_namead1116
Other_nameY48B6A.4.1:c.806-1G>A
HGVSgCHROMOSOME_II:g.14169168C>T
Sequence_detailsSMapS_parentSequenceY48B6A
Flanking_sequencesatgagaagtaaattgaaaattcacaattcaaaatcacaaacttcctatccgtgatggtatt
Mapping_targetY48B6A
Type_of_mutationSubstitutiongaPerson_evidenceWBPerson32
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00005548
Component_of_genotypeWBGenotype00000131
LaboratoryDA
StatusLive
AffectsGeneWBGene00001133
TranscriptY48B6A.4.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY48B6A.4.1:c.806-1G>A
Intron_number4/7
InteractorWBInteraction000008581
WBInteraction000008584
WBInteraction000008585
WBInteraction000008586
WBInteraction000008587
WBInteraction000008588
WBInteraction000050585
WBInteraction000050830
WBInteraction000050831
WBInteraction000050832
WBInteraction000500414
WBInteraction000500415
WBInteraction000501377
WBInteraction000502896
WBInteraction000502898
WBInteraction000503452
WBInteraction000518774
WBInteraction000520146
WBInteraction000520147
WBInteraction000520148
WBInteraction000520149
WBInteraction000520150
WBInteraction000520153
WBInteraction000520154
WBInteraction000520155
WBInteraction000520156
WBInteraction000520356
WBInteraction000520357
WBInteraction000520558
WBInteraction000520602
WBInteraction000520615
WBInteraction000520620
WBInteraction000524838
WBInteraction000579027
GeneticsInterpolated_map_positionII22.4739
DescriptionPhenotype (16)
Phenotype_not_observedWBPhenotype:0001068Paper_evidenceWBPaper00031241
Curator_confirmedWBPerson712
RemarkPre-exposure to mianserin blocked serotonin-induced egg laying as it does in N2.Paper_evidenceWBPaper00031241
Curator_confirmedWBPerson712
Phenotype_assayTreatmentPre-exposure to 50uM mianserin.Paper_evidenceWBPaper00031241
Curator_confirmedWBPerson712
WBPhenotype:0002087Paper_evidenceWBPaper00031326
Curator_confirmedWBPerson2857
Remarkgrowth in hydrogen sulfide enhances thermotolerance relative to untreated animalsPaper_evidenceWBPaper00031326
Curator_confirmedWBPerson2857
Reference (19)
RemarkThis sequence alteration has not been confirmed.Person_evidenceWBPerson32
MethodSubstitution_allele