WormBase Tree Display for RNAi: WBRNAi00088418
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| WBRNAi00088418 | Homol | Homol_homol | F10G7:RNAi | ||
|---|---|---|---|---|---|
| K08A8:RNAi | |||||
| Sequence_info | DNA_text | ATGTTCTATGCACAGTTCGTTCTCGCCAAAAAGGGACCGTTGGCAAAAGTGTGGCTGGCAGCTCACTGGGAAAAAAAGCTGACAAAGGCGCAAATCTTCGAAACAGATGTTCCCCAAGCGATCGAGGAAGTCATTCGCCCCAAGGTTAAAATGGCGCTCCGAACAGTTGGACATCTTCTCCTTGGAATCGTGAGAATCTACTCGAAGAAGACACGATATCTTCTGGCTGATACAAATGAAGCGTATCAAAAGATGAAGATTAACTTCCGCAACGGATTCAGTTTTGAAGTCGACATTCCAGAGAATGCAGAAATTGAAGAGGATTTCTCAAACTTCATTGATAAGTACAATATCACAGTGCCCGAGTTCCACGATGCCGACTACAATGAGCAGCTCATTATGGCTAATGTGAGCCGTCGTGAAGACATCACCATGAAAGAAACCGTCAATTTCAATGTCGAGTTCAACATTGACGCAGATTTCGATGGGTTCGGTGACGAAGGAGAATCTTGGCAACTCGATCATCTCTACGGATCGGTGGAACCTTTGTCTTTGCGCCCCACTCCTCAGCCAGAATCGTTGATGGAAGTCGAACGAGATCGTGATGTGGCTGCAAATGGAACGGAAATTTCCCGTATAGATGCGGATAGTGTGATTTTCTCCGAAGGACCAACACGTCCAAATCTTATTTTTGACAATCAGGAAGGCGGAAATTTCATGCCTGAAATGAACCTGAAGGTTGAGAATCAAACACTGGAAAACGATGGTGGTGTTGGGCCTGCTGATATGTTCAGCTCAATGATTCATCCCGTCAGAGAGCATGCTGTCGCAGATGTTCAAAACGACGATGGTATGGACTTTGACTATCAACCGTTCGAGCCTGAAAACGTTGAGCCATCGAGACCACAAAGTCCCGAGTCATTTGCCCTGGAGCCTCTAGATGTGGAGCACATGGAAGGACGGAAAAAACGTCAGAGAAAAGCGAGAAAGCTGATTGTCGATGCTGAAACTATGATTTCAAACGACGCTTTCCGAGAGCAACAAGAAGACTTCTCCGATACGATGCGAGTAGTTGAAATGGCGCCTCCTACCAGAAAGATGTTCAATTTATGCGTCAGCGGAGATCTTCAACACCTCAGCCGTGAACCTGGATGCAAAATGTTCAACAGAGAACTCCTTCAAAGATACAGGAGATGTTTGGTCACCCGAGAGTTCGATCTCAATTACACCATGCAAGAGTTGAGCGATAGTTCGAGTTTCACTCCGTCAATGGAAGCTCAAGCTGAGCCATGGGAGGACTTGAACCTCAATGAGGACATTCAAGAAGATATTCAAGCGCAGGGACCAGCCGTTGATGAATTCTTTAATGATGTGCGCATGGATGATGATGATGACAGACAACCAGCTCAGGAAATGGACTTTGGTGACAACTTCGATTTTCCACAAGAAGTAGAACATCAAGAGTGTGCTCCGATCCCTATCCAGAGTGGATTCGCTGGAGAGAACAAAGAGAACGAGGACGCAGAGGATTGGTCTGATCCGTTCGGTTCTTCAAATTCCAGCAGACGTGGCCAGCTTGAAGCCTATGGATTCGGAAATACTTCGACCTACAAGGAAGACGATGGCAAATGGGCGAAACGCGCCAAGCACATTCTAAAGAAAGTCTCCGCGGATATTGAGACTTCGGGACAAGCGGACTTCTCATCTGTCACAGCAACTGCCAAGAATCGCAAGCAAGCTGCAGAGCAATTTTATTCGTTGCTTACCCTGGCCAAGTCTCAAGCAATAAGTGTTGATCAATCAGAGCCATACGGAGAGATCGTAATTCGTCCAGGAGCCAATTTCAAAGAAGCATGTCCACTGAGCTCTCCGAAACCGATGGGACTTGGAAATACAATGGAAAATTCCACTATGAGAACCCCAATGAGACCAGTTTAA | |||
| ATGTGTCATCCAATCGAATTCTGCATTTGCACCATAAGTGACGCGTCCGCGCACACGTCCTCTTCTCGGACATCTTTCTGTACACCCTCTACATCTCACATTGTCTCTCCCTCTTTCCCTATCTGCATCGCAGCTAAATGCTCGCGTTGCGGTTGCGTCGCGGCCATGTTTTATGCCGACTTCGTTTTGTCGAAGAAAGGTCCCCTTTCAAAAGTGTGGCTTGCCGCTCATTGGGAGAAAAAGCTTTCGAAAGCTCAAATTTTTGAGACCGATGTTGATGAAGCTGTGAACGAAATTATGCAACCATCTCAAAAACTGGCACTCCGTACCACTGGTCATTTGCTATTAGGAATCTGCAGAGTTTATTCAAGAAAGACAAAATATCTTCTTGCTGATTGTAACGAAGCATTCCTCAAAATCAAGCTTGTTTTCCGTTCCGGTGCTCTGGACCAGCCAAATCCAGTTTTGCCTACGTTTTCCATCCAGGACATCTACGGAGATTTCGGTGACAATGTTTTGCCAGAGTTTGACGAAGAGGAGCTCAATCACGCGCCCATTTGCCAGAGCCGTCTTGACGATATCACATTGAAAGAGGATATTCCTCAAAAGTTCACTTACAACTATGGAGAACCTCTTGAGGATGATGACTTCGGAGAAATCGCTGCTGGTGTTGGACCAGAGGACTATTACCGTTTAATGGAAGATGTTAACAAAATGGATCTTGAGATGGAATTGGCACGTGATGCTGCCACAACAAGTGACAACTTGTTTGGTCGTGAACGCGAGCCAACTCCATTCTTGAACGATGCACACGCCCCCGGAAACGCAATTTTCGGTGATGAAGACTTTGCTGGTGGTGACATGGATGATGACGATCACAACGTTCAAGGATCTTCTGGATTCACTGACAACAATGCTATGCACATGGAAGACATGGACTACGAATCCGGCAACACAATGATGCGTGGAGAAACTCCACTCCGTTCTGACACTCCGAACACTTTCCGTGCACCGAGCCCAGCCCCGTCTATTGCTCCGTCGGTTGCCACCTCTGTCAGCGCAATGGAACACGATACTATCGAGTCATATTATGAGCGTCAAGCTCAGAAGCGTGCAATGCAGAAAGAGCAAAACATGAGGAAACGCCGTGTTGATGATGTCAAGATGATCACTGGAGAAGAGATGAAGGGCAATATGGCTGATTTTAGCGATATTCTTACTCGCCTTGATTTGGCCCCGCCGTCGCGCAAGCTGATGATGGGAAAGAAACGCAGTCACGCCGAGTATATGCACCACAATCCTGGAATGATTGGATTCTCAAAGAACAAACAGTTTATCCGAAAATATCAGAGTTATTTGGTAGTTACCAAGCACGACGACGTTGACGAGAAAAACGAGTGGATCAAAAACGCTTTGGGTCTTCGTGAGATTGGAGAAGAAGAGCTGCAACAGCAGCAACAAGAAATGGATATGCATGTTCAGGACGATTCATCGTATGTCGACGACTTTGACGAGGTTCCACCACTCGACTTTGATCAACTGGATATGATGGATATGCCACAATCGATGGATGATATCAACATGGTCGACGATGATGTACCACAGCGTAACCCATTGTCACCGTTTGCCCCGATGGTCGAAGATGAGGAGATGTCTCCAAGTGAGAAGCGCAAGAAGCGTGATGAAGAGAAAGAAGAGCCAGAGACTGACGAGGATAACCGCTGGTCAAAGAGAACTCACGCGTTGTTGCAGAACATTGCGACTAAATTGGAAAATCAAAATGGACAGGTTGAACTGGATGAAATGTTGAAGAAGGGAACAAGTCGAAAGGTGGCTGCCGCCAAGTTCTACTCTCTTCTGTGTCTGAAAAAGAATCAGTGCATCGATATCGAACAGAAGGAGCCATACGGAGACATTATGATTAAGGCCGGGCCCAATATCAACATCAACACGATCTAA | |||||
| Experiment | Laboratory | YM | |||
| Date | 01 Jun 2003 00:00:00 | ||||
| Strain | WBStrain00000001 | ||||
| Temperature | 20 | ||||
| Delivered_by | Soaking | ||||
| Inhibits | Predicted_gene | K08A8.3b | Inferred_automatically | RNAi_primary | |
| K08A8.3a | Inferred_automatically | RNAi_primary | |||
| F10G7.4 | Inferred_automatically | RNAi_primary | |||
| K08A8.3c | Inferred_automatically | RNAi_primary | |||
| K08A8.3d | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00004737 | Inferred_automatically | RNAi_primary | ||
| WBGene00000591 | Inferred_automatically | RNAi_primary | |||
| Transcript | K08A8.3a.1 | Inferred_automatically | RNAi_primary | ||
| K08A8.3d.1 | Inferred_automatically | RNAi_primary | |||
| F10G7.4.1 | Inferred_automatically | RNAi_primary | |||
| K08A8.3c.1 | Inferred_automatically | RNAi_primary | |||
| K08A8.3b.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00005937 | ||||
| Phenotype | WBPhenotype:0000050 | Remark | When the function of coh-1 and scc-1/coh-2 was simultaneously disrupted by RNAi, the F1 embryos displayed phenotypes similar to those of scc-1/coh-2(RNAi) worms, with no apparent enhancement in the phenotypes. | ||
| Penetrance | Complete | ||||
| WBPhenotype:0000773 | Remark | When the function of coh-1 and scc-1/coh-2 was simultaneously disrupted by RNAi, the F1 embryos displayed phenotypes similar to those of scc-1/coh-2(RNAi) worms, with no apparent enhancement in the phenotypes. | |||
| Penetrance | Complete | ||||
| Remark | paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used yk226d1 (coh-1) and yk256h5(scc-1/coh-2). | ||||
| Method | RNAi |
