WormBase Tree Display for Expression_cluster: WBPaper00044434:2-deoxy-D-glucose_upregulated
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WBPaper00044434:2-deoxy-D-glucose_upregulated | Description | Genes that showed increased expression in all age groups after treatment with 5mM 2-deoxy-D-glucose (DOG). | |
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Species | Caenorhabditis elegans | ||
Algorithm | DEG between controls and samples treated with DOG were identified using the edgeR and the DESeq software available within the R statistical language suite. Both packages provide tests for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. Calculated p-values were adjusted for multiple testing using the Benjamini-Hochberg correction algorithm. Genes were regarded as differentially expressed when significance on 99% confidence level was confirmed by both tools. | ||
Reference | WBPaper00044434 | ||
Based_on_WB_Release | |||
Gene | WBGene00017756 | ||
WBGene00003879 | |||
WBGene00019473 | |||
WBGene00001772 | |||
Attribute_of | RNASeq | ||
Regulation | Regulated_by_molecule | WBMol:00004845 | |
Associated_with | Life_stage | WBls:0000057 |