WormBase Tree Display for Expression_cluster: WBPaper00040998:nhr-80_regulated
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| WBPaper00040998:nhr-80_regulated | Description | Differentially expressed genes in nhr-80(tm1011) compared to wild-type animals using microarray analysis. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Pair-wise significance testing (mutant vs. wild-type) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Criteria for differential expression was set by employing log2(ratio) >= 0.848 and p-value < 0.001. | ||
| Reference | WBPaper00040998 | ||
| Microarray_results | cea2.c.35201 | Fold change: 0.0213443790117874, p-value: 5.11E-08 | |
| cea2.c.39182 | Fold change: 0.222210670291643, p-value: 1.58E-06 | ||
| cea2.p.124403 | Fold change: 0.29730177875068, p-value: 3.49E-06 | ||
| cea2.i.25955 | Fold change: 0.285190928967106, p-value: 6.65E-06 | ||
| cea2.c.31436 | Fold change: 0.406126198178118, p-value: 2.85E-05 | ||
| cea2.i.54612 | Fold change: 0.435275281648062, p-value: 9.18E-05 | ||
| cea2.c.19871 | Fold change: 3.09512998708478, p-value: 9.37E-05 | ||
| cea2.c.21064 | Fold change: 2.18858740252148, p-value: 8.64E-05 | ||
| cea2.d.33151 | Fold change: 0.30145195692269, p-value: 7.59E-05 | ||
| cea2.i.18053 | Fold change: 0.211686328090632, p-value: 7.33E-05 | ||
| cea2.c.02775 | Fold change: 2.28152743173685, p-value: 0.000145 | ||
| cea2.p.127901 | Fold change: 0.45375957765858, p-value: 0.000134 | ||
| cea2.p.90417 | Fold change: 0.466516495768404, p-value: 0.00016 | ||
| cea2.p.142010 | Fold change: 0.444421340583285, p-value: 0.000202 | ||
| cea2.p.05632 | Fold change: 2.29739670999407, p-value: 0.000254 | ||
| cea2.p.158386 | Fold change: 0.486327473706143, p-value: 0.000291 | ||
| cea2.i.36871 | Fold change: 0.473028823362798, p-value: 0.000284 | ||
| cea2.c.13321 | Fold change: 0.479632059662632, p-value: 0.000243 | ||
| cea2.p.19901 | Fold change: 2.11403608112276, p-value: 0.000262 | ||
| cea2.d.04407 | Fold change: 1.91852823865053, p-value: 0.00037 | ||
| cea2.p.67570 | Fold change: 1.91852823865053, p-value: 0.000392 | ||
| cea2.p.149038 | Fold change: 0.438302860658018, p-value: 0.000406 | ||
| cea2.d.33921 | Fold change: 0.447512535463986, p-value: 0.000385 | ||
| cea2.c.06057 | Fold change: 2.77021893622185, p-value: 0.000369 | ||
| cea2.i.31671 | Fold change: 0.506979739895015, p-value: 0.000417 | ||
| cea2.c.16150 | Fold change: 0.543367431263029, p-value: 0.000546 | ||
| cea2.i.35082 | Fold change: 0.241484082231211, p-value: 0.000482 | ||
| cea2.p.141148 | Fold change: 0.447512535463986, p-value: 0.000616 | ||
| cea2.p.114258 | Fold change: 0.524858341811534, p-value: 0.000588 | ||
| cea2.i.20094 | Fold change: 2, p-value: 0.000601 | ||
| cea2.c.21122 | Fold change: 3.05251841792112, p-value: 0.00049 | ||
| cea2.p.75989 | Fold change: 0.406126198178118, p-value: 0.000565 | ||
| cea2.d.44087 | Fold change: 0.524858341811534, p-value: 0.000522 | ||
| cea2.i.22724 | Fold change: 0.166085726762064, p-value: 0.000613 | ||
| cea2.p.87235 | Fold change: 0.469761374607006, p-value: 0.000705 | ||
| cea2.c.20147 | Fold change: 1.84037530124975, p-value: 0.000735 | ||
| cea2.c.16346 | Fold change: 3.63007662126864, p-value: 0.000816 | ||
| cea2.d.16969 | Fold change: 0.222210670291643, p-value: 0.000841 | ||
| cea2.c.47012 | Fold change: 0.469761374607006, p-value: 0.000841 | ||
| cea2.c.47027 | Fold change: 0.463294030945185, p-value: 0.000843 | ||
| cea2.d.20845 | Fold change: 0.363493129330078, p-value: 0.000936 | ||
| Gene (36) | |||
| Attribute_of | Microarray_experiment | WBPaper00040998:nhr-80_vs_WT_rep1 | |
| WBPaper00040998:nhr-80_vs_WT_rep2 | |||
| WBPaper00040998:nhr-80_vs_WT_rep3 | |||
| WBPaper00040998:nhr-80_vs_WT_rep4 | |||
| Regulation | Regulated_by_gene | WBGene00003670 | |
| Associated_with | Life_stage | WBls:0000038 |
