WormBase Tree Display for Gene: WBGene00306121
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| WBGene00306121 | SMap | S_parent | Sequence | Y48G1BM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y48G1BM.10 | |||||||
| Molecular_name | Y48G1BM.10 | ||||||||
| Y48G1BM.10.1 | |||||||||
| CE54312 | |||||||||
| Other_name | CELE_Y48G1BM.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y48G1BM.10 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_Y48G1BM.10 | |||||
| NCBI | gene | 62532685 | |||||||
| RefSeq | protein | NM_001393038.1 | |||||||
| TrEMBL | UniProtAcc | A0A7R9SUJ1 | |||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SUJ1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 10 Nov 2020 23:53:02 | WBPerson51134 | Event | Split_from | WBGene00021671 | ||
| Split_from | WBGene00021671 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (58) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g15618 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on microarray studies. Is affected by several genes including isp-1; alg-1; and mut-2 based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G1BM.10 | |||||||
| Corresponding_transcript | Y48G1BM.10.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00055472 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058283 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019988 | Inferred_automatically | RNAi_primary | |||||||
| Microarray_results | 187373_s_at | ||||||||
| A_12_P176576 | |||||||||
| GPL19516_CGZ0047239 | |||||||||
| GPL21109_Y48G1BM.6 | |||||||||
| GPL8673_Y48G1BM_5P01670 | |||||||||
| cea2.3.27268 | |||||||||
| Expression_cluster | WBPaper00025141:N2_Expressed_Genes | ||||||||
| WBPaper00025141:unc-4::GFP_Enriched_Genes | |||||||||
| WBPaper00025141:unc-4::GFP_Expressed_Genes | |||||||||
| WBPaper00027111:rde-3(ne298)_upregulated | |||||||||
| WBPaper00030839:Embryo_A_Class | |||||||||
| WBPaper00030839:Embryo_Pan_Neuronal | |||||||||
| WBPaper00031003:0hr_muscle_depleted | |||||||||
| WBPaper00031003:24hr_muscle_depleted | |||||||||
| WBPaper00031003:total_muscle_depleted | |||||||||
| WBPaper00035227:heat_shock_regulated | |||||||||
| WBPaper00035588:alg-1(-)_upregulated | |||||||||
| WBPaper00036286:Pattern_H | |||||||||
| WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2 | |||||||||
| WBPaper00041939:control_vs_EtBr-exposed_48h | |||||||||
| WBPaper00041939:control_vs_UVC-EtBr-exposed_48h | |||||||||
| WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h | |||||||||
| WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h | |||||||||
| WBPaper00042234:xpa-1_upregulated | |||||||||
| WBPaper00045263:isp-1(qm150)_upregulated | |||||||||
| WBPaper00045263:nuo-6(qm200)_upregulated | |||||||||
| Map_info | Map | I | |||||||
| Positive | Positive_clone | Y48G1BM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | -19.1185 | |||||||
| Remark | [2020-11-10T23:53:02.969Z WBPerson51134] Gene Split from WBGene00021671: Seems to be a fusion of CDS Y48G1BM.6 and CDS Y48G1BM.10 | Curator_confirmed | WBPerson51134 | ||||||
| Method | Gene |
