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WormBase Tree Display for Gene: WBGene00276778

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Name Class

WBGene00276778SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameSequence_namePPA38409
Molecular_namePPA38409
PPA38409.1
PP19390
Public_namePPA38409
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000032376.194From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101125.398From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00283169
OrthologWBGene00034836Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271001Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00015455Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018532Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239007Onchocerca volvulusFrom_analysisWormBase-Compara
FL83_00775Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05993Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14794Oscheius tipulaeFrom_analysisWormBase-Compara
ParalogWBGene00095294Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans F47B7.1 and txt-9. In C. elegans, txt-9 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA38409
Corresponding_transcriptPPA38409.1
Other_sequence (70)
Experimental_infoMicroarray_resultsGPL14372_Probes_51420
GPL14372_Probes_51421
GPL14372_Probes_51422
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene