WormBase Tree Display for Gene: WBGene00276778

WBGene00276778 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 1
    Name: Sequence_name: PPA38409
      Molecular_name: PPA38409
        PPA38409.1
        PP19390
      Public_name: PPA38409
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 376.194 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 125.398 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00283169
    Ortholog: WBGene00034836 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00271001 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00015455 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018532 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239007 Onchocerca volvulus From_analysis: WormBase-Compara
      FL83_00775 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_05993 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14794 Oscheius tipulae From_analysis: WormBase-Compara
    Paralog: WBGene00095294 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans F47B7.1 and txt-9. In C. elegans, txt-9 is involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA38409
    Corresponding_transcript: PPA38409.1
    Other_sequence: AI601094.1
      Dviv_isotig35922
      ES409365.1
      NAC01021_1
      BU086957.1
      CV200345.1
      HC00563
      AE01378
      Oden_isotig26637
      BM536488.1
      AE02768
      AE01394
      HC01608
      AE01388
      OOC03071_1
      EX008105.1
      PTC03591_1
      AE02147
      BU086924.1
      AYC00723_1
      EX916836.1
      AS17414
      EX014174.1
      NBC01528_1
      CB043072.1
      BU087087.1
      Tcir_isotig10040
      NB07431
      BU088578.1
      HCC00629_2
      BU088753.1
      TDC00306_1
      JI216745.1
      HBC05277_1
      EX013038.1
      Tcir_isotig28648
      HC04251
      AS03903
      PT01027
      PPC03443_1
      BXC04954_1
      PP01064
      AE01108
      ACC01418_1
      AYC00683_1
      PVC01141_1
      OVC02349_1
      BMC00225_2
      AS16870
      BU088286.1
      Name_isotig07023
      BF154355.1
      PT04126
      BMC00225_1
      AS02123
      ES408508.1
      AE00455
      AYC01258_1
      ES410538.1
      CB043172.1
      ES413218.1
      CV200355.1
      JI178951.1
      CBC01159_1
      ASC00726_1
      BU088264.1
      Hbac_isotig04627
      CJC03737_1
      BU666406.1
      CB043195.1
  Experimental_info: Microarray_results: GPL14372_Probes_51420
      GPL14372_Probes_51421
      GPL14372_Probes_51422
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene