WormBase Tree Display for Gene: WBGene00018532
expand all nodes | collapse all nodes | view schema
| WBGene00018532 | SMap | S_parent | Sequence | F47B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pmpl-1 | Author_evidence | WBPerson9 | |||||
| Sequence_name | F47B7.1 | ||||||||
| Molecular_name | F47B7.1 | ||||||||
| F47B7.1.1 | |||||||||
| CE02743 | |||||||||
| Other_name | CELE_F47B7.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pmpl-1 | ||||||||
| DB_info | Database | AceView | gene | XE407 | |||||
| WormQTL | gene | WBGene00018532 | |||||||
| WormFlux | gene | WBGene00018532 | |||||||
| NDB | locus_tag | CELE_F47B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018532|UniProtKB=Q20516 | |||||||
| family | PTHR21659 | ||||||||
| NCBI | gene | 180666 | |||||||
| RefSeq | protein | NM_001392751.1 | |||||||
| SwissProt | UniProtAcc | Q20516 | |||||||
| UniProt_GCRP | UniProtAcc | Q20516 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | pmpl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pmpl | ||||||||
| Allele | WBVar00499884 | ||||||||
| WBVar01499636 | |||||||||
| WBVar01136241 | |||||||||
| WBVar01136242 | |||||||||
| WBVar01136243 | |||||||||
| WBVar01136244 | |||||||||
| WBVar01136245 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068343 | ||||||||
| 00068344 | |||||||||
| 00123649 | |||||||||
| Ortholog | WBGene00034836 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| FL83_00775 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| OTIPU.nOt.2.0.1.g14794 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| WBGene00239007 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
| WBGene00276778 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| SGD:S000003687 | Saccharomyces cerevisiae | From_analysis | EnsEMBL-Compara | ||||||
| OrthoFinder | |||||||||
| Panther | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in several structures, including hypodermis; vulva; and vulval precursor cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47B7.1 | |||||||
| Corresponding_transcript | F47B7.1.1 | ||||||||
| Other_sequence (96) | |||||||||
| Associated_feature | WBsf662622 | ||||||||
| WBsf717320 | |||||||||
| WBsf1004717 | |||||||||
| WBsf1004718 | |||||||||
| WBsf1004719 | |||||||||
| WBsf1004720 | |||||||||
| WBsf1022673 | |||||||||
| WBsf1022674 | |||||||||
| WBsf235524 | |||||||||
| WBsf235525 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047610 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015153 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001469 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032412 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13596 | ||||||||
| Expr1020630 | |||||||||
| Expr1037984 | |||||||||
| Expr1151446 | |||||||||
| Expr2003833 | |||||||||
| Expr2022054 | |||||||||
| Drives_construct | WBCnstr00026440 | ||||||||
| Construct_product | WBCnstr00026440 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction | WBInteraction000277764 | ||||||||
| WBInteraction000504297 | |||||||||
| Map_info | Positive | Positive_clone | F47B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -9.40603 | |||||||
| Reference | WBPaper00058032 | ||||||||
| WBPaper00060275 | |||||||||
| WBPaper00063362 | |||||||||
| Method | Gene |
