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WormBase Tree Display for Gene: WBGene00226094

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Name Class

WBGene00226094SMapS_parentSequenceBm_v4_Chr3_scaffold_001
IdentityVersion7
NameCGC_nameBma-unc-40From_analysisInferred_from_orthology
Sequence_nameBm5833
Molecular_nameBm5833
Bm5833.1
BM45234
Other_nameTAG5833Curator_confirmedWBPerson4055
Bm1_41685ACurator_confirmedWBPerson4055
Bm1_41690ACurator_confirmedWBPerson4055
TAG14354
Bm1_41685Person_evidenceWBPerson5841
Bm1_41690Person_evidenceWBPerson5841
Public_nameBma-unc-40
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
224 Mar 2014 11:31:07WBPerson4055Name_changeCGC_nameBma-unc-40
302 Dec 2015 10:31:22WBPerson4055EventAcquires_mergeWBGene00234615
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-unc-40
604 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-unc-40
Acquires_mergeWBGene00234615
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKM (11)
OrthologWBGene00160417Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162859Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035291Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g10693Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6080Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6416Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9390Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g9393Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17082Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7666Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1487Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18061Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23251Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4203Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4204Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13295.g24171Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-40Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15165Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00491.g12060Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06376Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001309Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06699Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17054Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10282300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00006776Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00060358Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113211Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00126223Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210117Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00215004Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrI_pilon.g978Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238359Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262661Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297116Trichuris murisFrom_analysisWormBase-Compara
WBGene00301123Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00222569Brugia malayiFrom_analysisWormBase-Compara
WBGene00222637Brugia malayiFrom_analysisWormBase-Compara
WBGene00223169Brugia malayiFrom_analysisWormBase-Compara
WBGene00225216Brugia malayiFrom_analysisWormBase-Compara
WBGene00227085Brugia malayiFrom_analysisWormBase-Compara
WBGene00227726Brugia malayiFrom_analysisWormBase-Compara
WBGene00228273Brugia malayiFrom_analysisWormBase-Compara
WBGene00228483Brugia malayiFrom_analysisWormBase-Compara
WBGene00231083Brugia malayiFrom_analysisWormBase-Compara
WBGene00269356Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5833
Corresponding_transcriptBm5833.1
Other_sequence (35)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P5
WBPaper00049974:ivermectin_100nM_48h_upregulated
WBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Micro_Upregulated
ReferenceWBPaper00045439
WBPaper00048750
Remark[190208 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene