WormBase Tree Display for Gene: WBGene00227726
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| WBGene00227726 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
|---|---|---|---|---|---|---|
| Identity | Version | 11 | ||||
| Name | CGC_name | Bma-sax-3 | From_analysis | Inferred_from_orthology | ||
| Sequence_name | Bm7465 | |||||
| Molecular_name | Bm7465a | |||||
| Bm7465a.1 | ||||||
| BM39771 | ||||||
| Bm7465b | ||||||
| BM47477 | ||||||
| Bm7465c | ||||||
| BM47499 | ||||||
| Bm7465b.1 | ||||||
| Bm7465c.1 | ||||||
| Other_name (11) | ||||||
| Public_name | Bma-sax-3 | |||||
| Species | Brugia malayi | |||||
| History | Version_change (11) | |||||
| Acquires_merge | WBGene00220940 | |||||
| WBGene00221111 | ||||||
| WBGene00232846 | ||||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | sax | |||||
| RNASeq_FPKM (11) | ||||||
| Contained_in_operon | BMOP2728 | |||||
| Ortholog (34) | ||||||
| Paralog | WBGene00222569 | Brugia malayi | From_analysis | WormBase-Compara | ||
| WBGene00222637 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00223169 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00225216 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00226094 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00227085 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00228273 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00228483 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00231083 | Brugia malayi | From_analysis | WormBase-Compara | |||
| WBGene00269356 | Brugia malayi | From_analysis | WormBase-Compara | |||
| Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Bm7465a | ||||
| Bm7465b | ||||||
| Bm7465c | ||||||
| Corresponding_transcript | Bm7465a.1 | |||||
| Bm7465b.1 | ||||||
| Bm7465c.1 | ||||||
| Other_sequence (35) | ||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P5 | ||||
| WBPaper00049974:ivermectin_100nM_48h_upregulated | ||||||
| WBPaper00051007:downregulated_F120_vs_F30 | ||||||
| WBPaper00051007:downregulated_F120_vs_F42 | ||||||
| WBPaper00051007:downregulated_M120_vs_F120 | ||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | ||||||
| Reference | WBPaper00045439 | |||||
| WBPaper00048750 | ||||||
| Remark | [190208 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
| [200204 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| [210528 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Method | Gene |
