WormBase Tree Display for Gene: WBGene00227726

WBGene00227726 SMap: S_parent: Sequence: Bm_v4_ChrX_scaffold_001
  Identity: Version: 11
    Name: CGC_name: Bma-sax-3 From_analysis: Inferred_from_orthology
      Sequence_name: Bm7465
      Molecular_name: Bm7465a
        Bm7465a.1
        BM39771
        Bm7465b
        BM47477
        Bm7465c
        BM47499
        Bm7465b.1
        Bm7465c.1
      Other_name (11)
      Public_name: Bma-sax-3
    Species: Brugia malayi
    History: Version_change (11)
      Acquires_merge: WBGene00220940
        WBGene00221111
        WBGene00232846
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sax
    RNASeq_FPKM (11)
    Contained_in_operon: BMOP2728
    Ortholog: WBGene00148619 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00034790 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g2329 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12021 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3884 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10471 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5898 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8996 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5061 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9460 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25465 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16259 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00024.g1476 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_09429.g22059 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-sax-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_X.g23886 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18177 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00313.g9231 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00818.g15761 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00829 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_00830 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024104 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12222 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12223 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8691 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0269800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00004729 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00051982 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00104171 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00128991 Caenorhabditis japonica From_analysis: WormBase-Compara
      chrX_pilon.g18763 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242200 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267281 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302741 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00222569 Brugia malayi From_analysis: WormBase-Compara
      WBGene00222637 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223169 Brugia malayi From_analysis: WormBase-Compara
      WBGene00225216 Brugia malayi From_analysis: WormBase-Compara
      WBGene00226094 Brugia malayi From_analysis: WormBase-Compara
      WBGene00227085 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228273 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228483 Brugia malayi From_analysis: WormBase-Compara
      WBGene00231083 Brugia malayi From_analysis: WormBase-Compara
      WBGene00269356 Brugia malayi From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Bm7465a
      Bm7465b
      Bm7465c
    Corresponding_transcript: Bm7465a.1
      Bm7465b.1
      Bm7465c.1
    Other_sequence (35)
  Experimental_info: Expression_cluster: WBPaper00045439:BM_Cluster_P5
      WBPaper00049974:ivermectin_100nM_48h_upregulated
      WBPaper00051007:downregulated_F120_vs_F30
      WBPaper00051007:downregulated_F120_vs_F42
      WBPaper00051007:downregulated_M120_vs_F120
      WBPaper00061765:L3_vs_Adult_Upregulated
  Reference: WBPaper00045439
    WBPaper00048750
  Remark: [190208 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200204 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene