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WormBase Tree Display for Gene: WBGene00219309

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Name Class

WBGene00219309SMapS_parentSequenceF26F2
IdentityVersion1
NameSequence_nameF26F2.13
Molecular_nameF26F2.13
F26F2.13.1
CE46589
Other_nameCELE_F26F2.13Accession_evidenceNDBBX284605
Public_nameF26F2.13
DB_infoDatabaseWormFluxgeneWBGene00219309
NDBlocus_tagCELE_F26F2.13
NCBIgene13218858
RefSeqproteinNM_001269999.2
TREEFAMTREEFAM_IDTF322777
TrEMBLUniProtAccH2L2H9
UniProt_GCRPUniProtAccH2L2H9
SpeciesCaenorhabditis elegans
HistoryVersion_change127 Oct 2011 12:09:16WBPerson4025EventSplit_fromWBGene00009167
Split_fromWBGene00009167
StatusLive
Gene_infoBiotypeSO:0001217
Allele (17)
RNASeq_FPKM (74)
OrthologchrV_pilon.g18118Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00009167Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00009169Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00009170Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00050959Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in amphid sheath cell based on RNA-seq studies. Is affected by several genes including skn-1; eat-2; and sir-2.1 based on RNA-seq and microarray studies. Is affected by six chemicals including Rifampin; allantoin; and paraquat based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF26F2.13
Corresponding_transcriptF26F2.13.1
Experimental_infoRNAi_resultWBRNAi00045657Inferred_automaticallyRNAi_primary
Expr_patternExpr1149572
Expr2003027
Expr2021242
Microarray_results (13)
Expression_clusterWBPaper00049489:AMsh-glia_enriched
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00051137:N.parisii-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00053020:OrsayVirus-infection_upregulated_microarray
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055226:adr-1(tm668)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062345:bortezomib_30min_upregulated_N2
WBPaper00062345:bortezomib_30min_upregulated_zip-1(jy13)
WBPaper00062497:xpf-1(tm2842)_downregulated
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065086:N2_N.parisii_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:eri-1(mg366)_downregulated
WBPaper00027111:rrf-1(pk1417)_downregulated
WBPaper00028789:pmk-1_downregulated
WBPaper00035227:heat_shock_regulated
WBPaper00040876:mir-35_upregulated
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042574:N2_OrsayVirus_upregulated
WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
WBPaper00044535:male_upregulated
WBPaper00045015:acs-3(ft5)_downregulated
WBPaper00045401:N.parisii_34h_upregulated_N2
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
InteractionWBInteraction000567025
Map_infoPositivePositive_cloneF26F2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV25.013
MethodGene