WormBase Tree Display for Gene: WBGene00217407

WBGene00217407 SMap: S_parent: Sequence: Cjap.Contig18199
  Identity: Version: 2
    Name: CGC_name: Cjp-unc-55.1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA41559
      Molecular_name: CJA41559
        CJA41559.1
        JA50160
      Public_name: Cjp-unc-55.1
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:56 WBPerson4055 Event: Imported: Augustus import
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-unc-55.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.048326 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.756951 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.971771 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.0363 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.18659 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.9308 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.06788 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.29983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 0.637721 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (24)
    Paralog: WBGene00137481 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00119327 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00119542 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00119766 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00119838 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00119968 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00120313 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00120496 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00120567 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00121360 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00121931 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00122418 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00122685 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00122776 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00123193 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00123519 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00123618 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00123728 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00123976 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124216 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124337 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124455 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124484 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00124734 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00125220 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00125311 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00126310 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00126433 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00126594 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127401 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127569 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127893 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128037 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128550 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128653 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128868 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128901 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129305 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129339 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129780 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130338 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130395 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130502 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130736 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131487 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131954 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132662 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132850 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133329 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133804 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133815 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133848 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133880 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134540 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134864 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135326 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135502 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135540 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135839 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135988 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136086 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136333 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136603 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136697 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136726 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136773 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137511 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137651 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137748 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137842 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138394 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138649 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138671 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138693 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00175273 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00177303 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00179670 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00183639 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00184480 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00184490 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207132 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207388 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00208698 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209316 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209318 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209494 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210017 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212067 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212224 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212308 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00213152 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00213623 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214267 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214589 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00215732 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216057 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216710 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216790 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217088 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217117 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217596 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218378 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218448 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218786 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00219027 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Nuclear hormone receptor-like domain superfamily; Ligand-binding domain of nuclear hormone receptor; and Nuclear hormone receptor, ligand-binding domain. Is an ortholog of C. elegans unc-55. In C. elegans, unc-55 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (3)
  Experimental_info: Expr_pattern: Expr1085350
    Microarray_results: GPL14145_CJA18277_363-422_0.914_6_A
      GPL14145_CJA18277_676-735_0.754_41_B
  Method: Gene