WormBase Tree Display for Gene: WBGene00206515

WBGene00206515 SMap: S_parent: Sequence: T28C6
  Identity: Version: 1
    Name: Sequence_name: T28C6.11
      Molecular_name: T28C6.11
        T28C6.11.1
        CE46499
      Other_name: CELE_T28C6.11 Accession_evidence: NDB BX284604
      Public_name: T28C6.11
    DB_info: Database: WormFlux gene WBGene00206515
        NDB locus_tag CELE_T28C6.11
        NCBI gene 13197163
        RefSeq protein NM_001268411.3
        TrEMBL UniProtAcc G3MTY6
        UniProt_GCRP UniProtAcc G3MTY6
    Species: Caenorhabditis elegans
    History: Version_change: 1 20 Jul 2011 09:27:27 WBPerson4025 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (15)
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Enriched in several structures, including ABalpapaap; MSpppaaa; excretory cell; head mesodermal cell; and rectal epithelial cell based on single-cell RNA-seq and microarray studies. Is affected by several genes including sir-2.1; pmk-1; and atf-7 based on RNA-seq and microarray studies. Is affected by Rifampin and allantoin based on RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28C6.11
    Corresponding_transcript: T28C6.11.1
    Other_sequence: CRC08451_1
      CR04326
  Experimental_info: Expr_pattern: Expr1040512
      Expr1157943
      Expr2006608
      Expr2024825
    Microarray_results: SMD_T28C6.7
      GPL19516_CGZ0037452
      GPL21109_T28C6.11
    Expression_cluster: WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
      WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent
      WBPaper00060886:spr-5(by101)_upregulated
      WBPaper00061340:B
      WBPaper00061340:Body_wall_muscle
      WBPaper00061340:Excretory_cell
      WBPaper00061340:Excretory_cell_parent
      WBPaper00061340:F_U
      WBPaper00061340:hmc_and_homolog
      WBPaper00061340:K_Kprime
      WBPaper00061340:Parents_of_U_F_B_DVA
      WBPaper00061340:Parent_of_exc_gland_AVK
      WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
      WBPaper00061340:Parent_of_K_Kprime
      WBPaper00061340:RIM_parent
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066038:mip-1(how5)_downregulated
      cgc4489_group_16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
  Map_info: Positive: Positive_clone: T28C6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.98191
  Method: Gene