WormBase Tree Display for Gene: WBGene00191347

WBGene00191347 SMap: S_parent: Sequence: Cbre_Contig147
  Identity: Version: 2
    Name: CGC_name: Cbn-itr-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN29382
      Molecular_name: CBN29382
        CBN29382.1
        CN34044
      Public_name: Cbn-itr-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:52 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-itr-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: itr
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.333658 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.667317 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 15.5601 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        21.2892 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        26.1179 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        26.4388 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        33.0378 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 6.23184 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        6.30355 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        6.37526 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 3.54783 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.71251 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00227092
      00227093
      00227094
      00227095
      00227096
      00227097
      00227098
      00227099
      00227100
      00227101
    Ortholog: WBGene00002173 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028294 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00074864 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130571 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g11401 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3420 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16161 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17261 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6300 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g915 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16163 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g837 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16786 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g17340 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5399 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7890 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1395 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00211.g7110 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00623.g12902 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_03927.g18484 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_10274.g22555 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_13775.g24375 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-itr-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7968 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7969 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00007.g529 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12881 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013996 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02938 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15545 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40306000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_40306300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00062475 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00115426 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00224049 Brugia malayi From_analysis: WormBase-Compara
      chrIV_pilon.g10889 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241277 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267095 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286523 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00192195 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00163093 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193580 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193883 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193891 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable inositol 1,4,5 trisphosphate binding activity and inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Is an ortholog of C. elegans itr-1. In C. elegans, itr-1 is involved in several processes, including determination of adult lifespan; multicellular organism reproduction; and system process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN29382
    Corresponding_transcript: CBN29382.1
    Other_sequence (31)
  Experimental_info: Microarray_results: GPL14142_CBN29382_8080-8139_0.773_284_C
      GPL14142_CBN29382_8345-8404_0.927_11_B
      GPL14142_CBN29382_8517-8576_0.913_19_A
  Method: Gene