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WormBase Tree Display for Gene: WBGene00162861

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Name Class

WBGene00162861SMapS_parentSequenceCbre_Contig152
IdentityVersion2
NameCGC_nameCbn-unc-71.2From_analysisInferred_from_orthology
Sequence_nameCBN24136
Molecular_nameCBN24136
CBN24136.1
CN13602
Public_nameCbn-unc-71.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-unc-71.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
26.358From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
52.716From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.3596From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
4.58627From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
7.38303From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
7.7837From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
8.46949From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000382.46839From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
2.61403From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.75967From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001013.03825From_analysisRNASeq.brenneri.total_over_all_stages.control_median
9.82375From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00221758
00221759
00221760
OrthologWBGene00006804Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035908Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00063439Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00109478Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00135764Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4262Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g4264Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10454Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16786Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1859Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10471Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5791Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5864Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6137Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23867Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6862Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14976Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00616.g12810Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06871.g20532Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-71Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18025Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03084.g29011Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14517Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010958Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08571Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g24207Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g24208Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30293300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226643Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g9256Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246196Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261078Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289210Trichuris murisFrom_analysisWormBase-Compara
WBGene00289211Trichuris murisFrom_analysisWormBase-Compara
WBGene00289214Trichuris murisFrom_analysisWormBase-Compara
WBGene00301011Trichuris murisFrom_analysisWormBase-Compara
WBGene00302654Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00155271Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00161017Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00164245Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151753Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158339Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158824Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163952Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans unc-71.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN24136
Corresponding_transcriptCBN24136.1
Other_sequenceOden_isotig18192
Dviv_isotig35154
Oden_isotig17893
Oden_isotig18191
BMC03861_1
Oden_isotig29270
JI165373.1
MethodGene