Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00035908

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00035908SMapS_parentSequencecb25.fpc4030a2
IdentityVersion2
NameCGC_nameCbr-unc-71From_analysisInferred_from_orthology
Sequence_nameCBG15766
Molecular_nameCBG15766
CBG15766.1
CBP38446
Other_nameCBG_15766Accession_evidenceNDBHE600979
Public_nameCbr-unc-71
DB_infoDatabaseNDBlocus_tagCBG_15766
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-71
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000211.2814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.1133From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.9342From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
31.1244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
24.8985From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.5941From_analysisRNASeq.briggsae.WBls:0000002.control_median
30.254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003135.356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
141.955From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
148.554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
144.859From_analysisRNASeq.briggsae.WBls:0000003.control_mean
150.667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000478.1472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
78.8252From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
79.5033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
72.6197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
76.0788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
76.8829From_analysisRNASeq.briggsae.WBls:0000004.control_mean
78.0654From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002716.2253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.99056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.21688From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.14425From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.796From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.2211From_analysisRNASeq.briggsae.WBls:0000027.control_median
18.7513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.29375From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.859426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.4436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.29121From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.60311From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.76262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.09921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004115.9806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
41.7456From_analysisRNASeq.briggsae.WBls:0000041.control_mean
47.3446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
49.4094From_analysisRNASeq.briggsae.WBls:0000041.control_median
51.4741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
52.183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.1699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
25.7915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
34.6573From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.5681From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.0675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.86375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.18941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.29853From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.5547From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.81728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.5367From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.7278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.68599From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.5502From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.6274From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.5752From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.5874From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139363
00139364
00139365
Ortholog (38)
ParalogWBGene00027962Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029451Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035232Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036610Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036634Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans unc-71.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15766
Corresponding_CDS_historyCBG15766:bp194
CBG15766:bp255
Corresponding_transcriptCBG15766.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1051301
Microarray_resultsGPL14143_CBG15766_1783-1842_0.790_83_C
GPL14143_CBG15766_2345-2404_0.873_21_B
GPL14143_CBG15766_2438-2497_0.906_13_A
MethodGene