WormBase Tree Display for Gene: WBGene00135987

WBGene00135987 SMap: S_parent: Sequence: Cjap.Contig17612
  Identity: Version: 2
    Name: CGC_name: Cjp-unc-112 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16784
      Molecular_name: CJA16784
        CJA16784.1
        JA48682
      Public_name: Cjp-unc-112
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-unc-112
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 136.588 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 79.0749 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 88.2556 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        91.1173 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        93.979 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 29.0433 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        31.6866 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        31.8595 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        32.8763 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        33.7033 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        34.5303 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        34.9035 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        37.7844 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        39.0192 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        42.4288 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 37.7844 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        52.0866 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200008
    Ortholog: WBGene00006836 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00027203 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00064391 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00158651 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223076 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1990 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10368 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1173 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7370 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17736 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18666 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15624 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2031 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14026 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g23708 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7480 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23667 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00125.g5037 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04890.g19193 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_12012.g23526 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-112 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15915 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00361.g10114 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_02618.g27253 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11922 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017456 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00267 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23283 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50349400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00097594 Pristionchus pacificus From_analysis: WormBase-Compara
      chrV_pilon.g16592 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243942 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257862 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295078 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00134500 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00212350 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16784
    Corresponding_transcript: CJA16784.1
    Other_sequence (83)
  Experimental_info: Expr_pattern: Expr1080028
    Microarray_results: GPL14145_CJA16784_1583-1642_0.936_2_C
      GPL14145_CJA16784_1804-1863_0.887_20_A
      GPL14145_CJA16784_1914-1973_0.886_23_B
  Method: Gene