WormBase Tree Display for Gene: WBGene00128399

WBGene00128399 SMap: S_parent: Sequence: Cjap.Contig17793
  Identity: Version: 2
    Name: CGC_name: Cjp-cpn-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA09195
      Molecular_name: CJA09195
        CJA09195.1
        JA09706
      Public_name: Cjp-cpn-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cpn-4
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 110.206 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 76.7416 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 59.8828 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        67.5067 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        75.1306 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 102.483 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        130.292 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        74.022 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        77.8833 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        84.5605 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        89.2115 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        90.0365 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        90.8615 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        90.9199 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        92.5292 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 81.7073 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        84.5605 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (30)
    Paralog: WBGene00122476 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123334 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00178953 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00131242 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129648 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131525 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136626 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA09195
    Corresponding_transcript: CJA09195.1
    Other_sequence (44)
  Experimental_info: Expr_pattern: Expr1078800
    Microarray_results: GPL14145_CJA09195_268-327_0.806_9_A
  Method: Gene