WormBase Tree Display for Gene: WBGene00123334

WBGene00123334 SMap: S_parent: Sequence: Cjap.Contig4525
  Identity: Version: 2
    Name: CGC_name: Cjp-cpn-3 From_analysis: Inferred_from_orthology
      Sequence_name: CJA04130
      Molecular_name: CJA04130
        CJA04130.1
        JA53422
      Public_name: Cjp-cpn-3
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cpn-3
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 641.575 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 888.338 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 843.594 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        865.289 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        886.983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1058.22 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1101.9 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1239.48 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        699.303 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        743.585 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        812.017 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        952.918 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        983.502 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        984.42 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        985.338 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 837.218 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        886.983 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (33)
    Paralog: WBGene00122476 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00128399 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00178953 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00131242 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129648 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131525 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136626 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04130
    Corresponding_transcript: CJA04130.1
    Other_sequence (207)
  Experimental_info: Expr_pattern: Expr1084306
    Microarray_results: GPL14145_CJA04130_216-275_0.716_19_A
      GPL14145_CJA04130_256-315_0.587_37_B
      GPL14145_CJA04130_55-114_0.918_1_C
  Method: Gene