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WormBase Tree Display for Gene: WBGene00107390

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Name Class

WBGene00107390SMapS_parentSequencePPA_ChrIII
Identity (5)
Gene_infoBiotypeSO:0001217
Gene_classnca
RNASeq_FPKMWBls:00000327.20328From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.40109From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00181262
00181263
00181264
00181265
00181266
Ortholog (43)
ParalogWBGene00091694Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092845Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116989Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118298Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans nca-2. In C. elegans, nca-2 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA17836
Corresponding_transcriptPPA17836.1
Other_sequence (26)
Experimental_infoMicroarray_resultsGPL14372_Probes_21202
GPL14372_Probes_21203
GPL14372_Probes_21204
GPL14372_Probes_21205
GPL14372_Probes_21206
GPL14372_Probes_73259
GPL14372_Probes_73260
GPL14372_Probes_73261
GPL14372_Probes_73262
GPL14372_Probes_73263
Expression_clusterWBPaper00041207:PP_dauer_up
Remark[190208 pad] The CGC name Ppa-nca-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-nca-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene