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WormBase Tree Display for CDS: PPA17836

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Name Class

PPA17836SMapS_parentSequencePPA_ChrIII
StructureSource_exons (59)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2874-1.13
DB_remarkPPA-NCA-2 protein; contains similarity to Pfam domain PF00520 (Ion transport protein); contains similarity to Interpro domains IPR028823 (Sodium leak channel NALCN), IPR005821 (Ion transport domain), IPR027359 (Voltage-dependent channel domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00107390
Corresponding_transcriptPPA17836.1
Corresponding_proteinPP60264
Corresponding_oligo_setGPL14372_Probes_21202
GPL14372_Probes_21203
GPL14372_Probes_21204
GPL14372_Probes_21205
GPL14372_Probes_21206
GPL14372_Probes_73259
GPL14372_Probes_73260
GPL14372_Probes_73261
GPL14372_Probes_73262
GPL14372_Probes_73263
Microarray_resultsGPL14372_Probes_21202
GPL14372_Probes_21203
GPL14372_Probes_21204
GPL14372_Probes_21205
GPL14372_Probes_21206
GPL14372_Probes_73259
GPL14372_Probes_73260
GPL14372_Probes_73261
GPL14372_Probes_73262
GPL14372_Probes_73263
RNASeq_FPKMWBls:00000327.20328From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2874-1.13Curator_confirmedWBPerson4055
Methodcurated