WormBase Tree Display for Gene: WBGene00102515

WBGene00102515 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 5
    Name: CGC_name: Ppa-unc-42 From_analysis: Inferred_from_orthology
      Sequence_name: PPA12961
      Molecular_name: PPA12961
        PPA12961.1
        PP60164
      Other_name: GENEPREDICTION_SNAP300000069807
        UMM-S2844-9.16 Person_evidence: WBPerson606
      Public_name: Ppa-unc-42
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        3 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-unc-42
        4 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-unc-42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 5.68195 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.89398 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00179126
    Ortholog: WBGene00145034 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00146038 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00038604 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00228192 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006778 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00135228 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00243065 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00249156 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g1096 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4624 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9632 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4818 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18360 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3352 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8199 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7966 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12452 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23776 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01040.g15468 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-42 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17652 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00614.g13578 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09640 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016951 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00121 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6476 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50256400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00062879 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g15335 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257909 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294422 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296487 Trichuris muris From_analysis: WormBase-Compara
    Paralog (16)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans unc-42. In C. elegans, unc-42 is involved in several processes, including larval locomotory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA12961
    Corresponding_transcript: PPA12961.1
    Other_sequence (19)
  Experimental_info: Microarray_results: GPL14372_Probes_26258
      GPL14372_Probes_81081
      GPL14372_Probes_81082
  Remark: [190208 pad] The CGC name Ppa-unc-42 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-unc-42 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene